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ACD4_59

Alias: ACD4_56390.11564.11

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_59_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

70..960
DNA (891bp) protein (297aa)
tyrosine type site-specific recombinase; K03733 integrase/recombinase XerC (db=KEGG evalue=3.0e-23 bit_score=112.0 identity=26.26 coverage=96.6329966329966)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=105 to=294 evalue=5.5e-37 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=110 to=291 evalue=3.7e-33 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=110 to=282 evalue=1.2e-28 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD4_59_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(957..1973)
DNA (1017bp) protein (339aa)
seg (db=Seg db_id=seg from=8 to=28)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=143 to=330 evalue=6.0e-16 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=146 to=330 evalue=2.0e-09 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=146 to=320 evalue=8.0e-09 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD4_59_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2471..3514)
DNA (1044bp) protein (348aa)
hypothetical protein
hypothetical protein Tax=ACD4
Uncharacterized protein n=3 Tax=Shewanella baltica RepID=A9L276_SHEB9
ACD4_59_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3507..3686)
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=10 to=23)
seg (db=Seg db_id=seg from=35 to=56)
transmembrane_regions 10..32 Tax=ACD4
ACD4_59_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(3722..4807)
DNA (1086bp) protein (362aa)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=40 to=319 evalue=2.2e-08 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
APH (db=HMMPfam db_id=PF01636 from=98 to=283 evalue=3.3e-08 interpro_id=IPR002575 interpro_description=Aminoglycoside phosphotransferase)
Protein kinase-like (PK-like) Tax=ACD4
ACD4_59_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(4820..5092)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=79 to=90)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=88 evalue=9.4e-10)
seg 79..90 Tax=ACD4
ACD4_59_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5637..6245)
DNA (609bp) protein (203aa)
seg (db=Seg db_id=seg from=62 to=73)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=43 to=54 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=3 to=110 evalue=9.7e-12)
Fer4 (db=HMMPfam db_id=PF00037 from=36 to=59 evalue=2.0e-07 interpro_id=IPR001450 interpro_description=4Fe-4S binding domain GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD4_59_8

Not on your lists

comp(6266..6808)
DNA (543bp) protein (181aa)
Phosphoglycerate mutase
Putative uncharacterized protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RLB0_9ACTO (db=UNIREF evalue=3.0e-18 bit_score=94.4 identity=30.11 coverage=94.475138121547)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=148 evalue=1.8e-30)
PHOSPHOGLYCERATE MUTASE (db=HMMPanther db_id=PTHR23029 from=2 to=141 evalue=2.8e-28)
ACD4_59_9
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(6820..7374)
DNA (555bp) protein (185aa)
NADPH-dependent FMN reductase n=1 Tax=Methanocaldococcus infernus ME RepID=D5VSD2_9EURY (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=44.53 coverage=65.945945945946)
NADPH-dependent FMN reductase
Flavoproteins (db=superfamily db_id=SSF52218 from=1 to=182 evalue=1.1e-33)
no description (db=Gene3D db_id=G3DSA:3.40.50.360 from=1 to=176 evalue=2.8e-31)
ACD4_59_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(7381..7806)
DNA (426bp) protein (142aa)
7381..7806 - (rbs_motif=TTAAT rbs_spacer=8bp)
hypothetical protein Tax=ACD4
ACD4_59_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(7812..9329)
DNA (1518bp) protein (506aa)
seg (db=Seg db_id=seg from=54 to=68)
seg 54..68 Tax=ACD4
ACD4_59_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(9345..11009)
DNA (1665bp) protein (555aa)
9345..11009 - (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD4
ACD4_59_13
ACD4, Gracilibacteria, Bacteria

Not on your lists

11307..11600
DNA (294bp) protein (98aa)
11307..11600 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD4
Displaying 13 items

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