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ACD4_60

Alias: ACD4_6857.13544.13

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_60_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

3..602
DNA (600bp) protein (200aa)
seg (db=Seg db_id=seg from=171 to=187)
seg (db=Seg db_id=seg from=155 to=165)
seg (db=Seg db_id=seg from=56 to=68)
seg (db=Seg db_id=seg from=9 to=33)
ACD4_60_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

665..3004
DNA (2340bp) protein (780aa)
putative surface layer protein (db=KEGG evalue=2.0e-08 bit_score=65.5 identity=28.03 coverage=28.0769230769231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
seg (db=Seg db_id=seg from=430 to=443)
seg (db=Seg db_id=seg from=143 to=150)
ACD4_60_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

3015..3824
DNA (810bp) protein (270aa)
prephenate dehydratase (EC:4.2.1.51)
PREPHENATE DEHYDRATASE (P PROTEIN) (db=HMMPanther db_id=PTHR21022 from=1 to=269 evalue=9.8e-64)
PDT (db=HMMPfam db_id=PF00800 from=5 to=180 evalue=1.9e-40 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
ACT-like (db=superfamily db_id=SSF55021 from=174 to=269 evalue=1.9e-21)
ACD4_60_4
unknown

Not on your lists

comp(3863..4978)
DNA (1116bp) protein (372aa)
Metallophosphoesterase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAR2_9BACT (db=UNIREF evalue=1.0e-43 bit_score=180.0 identity=33.33 coverage=65.8602150537634)
membrane-bound phosphohydrolase
seg (db=Seg db_id=seg from=78 to=97)
seg (db=Seg db_id=seg from=44 to=62)
ACD4_60_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5420..5899)
DNA (480bp) protein (160aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=155)
transmembrane_regions 37..59 Tax=ACD4
ACD4_60_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(6785..7585)
DNA (801bp) protein (267aa)
6785..7585 - (rbs_motif=TTAA rbs_spacer=8bp)
hypothetical protein Tax=ACD4
ACD4_60_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(7654..8097)
DNA (444bp) protein (148aa)
hypothetical protein (db=KEGG evalue=3.0e-09 bit_score=63.9 identity=35.85 coverage=58.7837837837838)
seg (db=Seg db_id=seg from=14 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
ACD4_60_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(8154..8990)
DNA (837bp) protein (279aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=26)
seg (db=Seg db_id=seg from=32 to=53)
seg (db=Seg db_id=seg from=72 to=86)
transmembrane_regions 5..26 Tax=ACD4
ACD4_60_9

Not on your lists

9162..9434
DNA (273bp) protein (91aa)
hypothetical protein
DUF156 (db=HMMPfam db_id=PF02583 from=5 to=86 evalue=8.9e-17 interpro_id=IPR003735 interpro_description=Protein of unknown function DUF156)
Uncharacterized protein {ECO:0000313|EMBL:EKE26357.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
protein of unknown function DUF156 alias=ACD3_C00008G00013,ACD3_1240.33365.67G0013,ACD3_1240.33365.67_13 id=49599 tax=ACD3 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD4_60_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

9444..9830
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=4 to=16)
seg (db=Seg db_id=seg from=105 to=117)
transmembrane_regions 4..26 Tax=ACD4
ACD4_60_11
ACD4, Gracilibacteria, Bacteria

Not on your lists

9979..11739
DNA (1761bp) protein (587aa)
heavy metal-binding domain-containing protein (db=KEGG evalue=2.0e-36 bit_score=157.0 identity=27.39 coverage=72.2316865417376)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
seg (db=Seg db_id=seg from=86 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
ACD4_60_12
ACD4, Gracilibacteria, Bacteria

Not on your lists

11739..12170
DNA (432bp) protein (144aa)
seg (db=Seg db_id=seg from=116 to=131)
seg (db=Seg db_id=seg from=81 to=94)
seg (db=Seg db_id=seg from=51 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=114 to=136)
ACD4_60_13
ACD4, Gracilibacteria, Bacteria

Not on your lists

12227..12538
DNA (312bp) protein (104aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=45 to=64)
DUF2078 (db=HMMPfam db_id=PF09851 from=31 to=103 evalue=9.3e-18 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
ACD4_60_14
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(12557..13336)
DNA (780bp) protein (260aa)
Aminoglycoside 6-adenylyltransferase
seg (db=Seg db_id=seg from=118 to=139)
hypothetical protein Tax=ACD4
UPI000289F644 related cluster n=1 Tax=unknown RepID=UPI000289F644
ACD4_60_15
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(13350..13580)
DNA (231bp) protein (77aa)
13350..13580 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD4
Displaying 15 items

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