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ACD4_103

Alias: ACD4_81183.6121.12

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_103_1
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1..231)
DNA (231bp) protein (77aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions 31..53 Tax=ACD4
ACD4_103_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(415..870)
DNA (456bp) protein (152aa)
415..870 - (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_103_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(882..1079)
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=23 to=34)
seg 23..34 Tax=ACD4
ACD4_103_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

1721..2839
DNA (1119bp) protein (373aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
seg (db=Seg db_id=seg from=182 to=201)
no description (db=HMMSmart db_id=SM00480 from=17 to=368 evalue=1.6e-60 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=372 evalue=1.8e-60 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD4_103_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

2850..3017
DNA (168bp) protein (56aa)
2850..3017 + (rbs_motif=TAAT rbs_spacer=9bp)
hypothetical protein Tax=ACD4
ACD4_103_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

3051..3344
DNA (294bp) protein (98aa)
3051..3344 + (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD4
ACD4_103_7
ACD4, Gracilibacteria, Bacteria

Not on your lists

3422..3628
DNA (207bp) protein (69aa)
3422..3628 + (rbs_motif=AAT rbs_spacer=12bp)
hypothetical protein Tax=ACD4
ACD4_103_8
ACD4, Gracilibacteria, Bacteria

Not on your lists

3773..3937
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
transmembrane_regions 2..21 Tax=ACD4
ACD4_103_9
ACD4, Gracilibacteria, Bacteria

Not on your lists


4374..5402
DNA (1029bp) protein (343aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha
pheS; phenylalanyl-tRNA synthetase subunit alpha
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=8 to=342 evalue=5.0e-93)
pheS: phenylalanyl-tRNA synthetase, alpha su (db=HMMTigr db_id=TIGR00468 from=38 to=342 evalue=4.3e-82 interpro_id=IPR004529 interpro_description=Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: phenylalanyl-tRNA aminoacylati
ACD4_103_10
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(5399..5578)
DNA (180bp) protein (60aa)
5399..5578 - (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD4
ACD4_103_11
ACD4, Gracilibacteria, Bacteria

Not on your lists


5819..6157
DNA (339bp) protein (113aa)
50S ribosomal protein L1
RIBOSOMAL PROTEIN L7AE FAMILY MEMBER (db=HMMPanther db_id=PTHR23105 from=21 to=113 evalue=2.9e-26)
50S RIBOSOMAL PROTEIN L1P (db=HMMPanther db_id=PTHR23105:SF5 from=21 to=113 evalue=2.9e-26)
Ribosomal protein L1 (db=superfamily db_id=SSF56808 from=6 to=113 evalue=5.9e-23 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
Displaying 11 items

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