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ACD4_106

Alias: ACD4_73628.5682.15

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_106_1
ACD4, Gracilibacteria, Bacteria

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comp(32..1012)
DNA (981bp) protein (327aa)
metalloendopeptidase, glycoprotease family (EC:3.4.24.57)
GLYCOPROTEASE (db=PatternScan db_id=PS01016 from=95 to=115 evalue=0.0 interpro_id=IPR017860 interpro_description=Peptidase M22, glycoprotease, conserved site GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
bact_gcp: putative glycoprotease GCP (db=HMMTigr db_id=TIGR03723 from=3 to=324 evalue=2.0e-95 interpro_id=IPR022450 interpro_description=Peptidase M22, O-sialoglycoprotein peptidase)
gcp_kae1: metallohydrolase, glycoprotease/Ka (db=HMMTigr db_id=TIGR00329 from=4 to=316 evalue=9.7e-87 interpro_id=IPR017861 interpro_description=Peptidase M22, glycoprotease, subgroup GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD4_106_2
ACD4, Gracilibacteria, Bacteria

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comp(1139..2755)
DNA (1617bp) protein (539aa)
seg (db=Seg db_id=seg from=141 to=163)
seg (db=Seg db_id=seg from=43 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=165)
transmembrane_regions 143..165 Tax=ACD4
ACD4_106_3
unknown

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comp(2748..3950)
DNA (1203bp) protein (401aa)
cell division protein (septum formation) n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B214C (db=UNIREF evalue=9.0e-21 bit_score=105.0 identity=23.72 coverage=67.5810473815461)
cell division protein FtsA (db=KEGG evalue=2.0e-07 bit_score=60.8 identity=17.79 coverage=79.0523690773067)
no description (db=HMMSmart db_id=SM00842 from=14 to=212 evalue=0.00061 interpro_id=IPR003494 interpro_description=Cell division protein FtsA domain GO=Biological Process: cell cycle (GO:0007049))
cell division protein (septum formation) n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B214C Tax=ACD4
ACD4_106_4
ACD4, Gracilibacteria, Bacteria

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comp(4010..4489)
DNA (480bp) protein (160aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
seg (db=Seg db_id=seg from=141 to=155)
RuvC (db=HMMPfam db_id=PF02075 from=4 to=149 evalue=1.6e-38 interpro_id=IPR002176 interpro_description=Crossover junction endodeoxyribonuclease RuvC GO=Molecular Function: endodeoxyribonuclease activity (GO:0004520), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=2 to=154 evalue=1.1e-36)
ACD4_106_5
ACD4, Gracilibacteria, Bacteria

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4539..4688
DNA (150bp) protein (50aa)
4539..4688 + (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD4
ACD4_106_6
ACD4, Gracilibacteria, Bacteria

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comp(4783..5565)
DNA (783bp) protein (261aa)
seg (db=Seg db_id=seg from=7 to=21)
seg 7..21 Tax=ACD4
Displaying 6 items

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