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ACD4_127

Alias: ACD4_8668.3317.11

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_127_1
ACD4, Gracilibacteria, Bacteria

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3..242
DNA (240bp) protein (80aa)
3..242 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD4
ACD4_127_2
ACD4, Gracilibacteria, Bacteria

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comp(135..965)
DNA (831bp) protein (277aa)
hypothetical protein (db=KEGG evalue=2.0e-17 bit_score=93.2 identity=27.51 coverage=81.2274368231047)
seg (db=Seg db_id=seg from=121 to=131)
hypothetical protein Tax=ACD4
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WV66_ACISM
ACD4_127_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1169..1381)
DNA (213bp) protein (71aa)
hypothetical protein
hypothetical protein Tax=ACD4
Uncharacterized protein n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4Q8_METMM
ACD4_127_4
ACD4, Gracilibacteria, Bacteria

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comp(1403..1618)
DNA (216bp) protein (72aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=54)
seg (db=Seg db_id=seg from=2 to=19)
transmembrane_regions 5..22 Tax=ACD4
ACD4_127_5
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1636..2424)
DNA (789bp) protein (263aa)
tsf; elongation factor Ts
seg (db=Seg db_id=seg from=40 to=51)
EF_TS_2 (db=PatternScan db_id=PS01127 from=73 to=83 evalue=0.0 interpro_id=IPR018101 interpro_description=Translation elongation factor Ts, conserved site GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
tsf: translation elongation factor Ts (db=HMMTigr db_id=TIGR00116 from=1 to=262 evalue=9.4e-55 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ACD4_127_6
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(2553..2891)
DNA (339bp) protein (113aa)
seg (db=Seg db_id=seg from=61 to=81)
seg (db=Seg db_id=seg from=9 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=39)
ACD4_127_7

Not on your lists


comp(2900..3355)
DNA (456bp) protein (152aa)
rpsB; 30S ribosomal protein S2
seg (db=Seg db_id=seg from=132 to=147)
RIBOSOMAL_S2_2 (db=PatternScan db_id=PS00963 from=50 to=74 evalue=0.0 interpro_id=IPR018130 interpro_description=Ribosomal protein S2, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S2 (db=superfamily db_id=SSF52313 from=1 to=134 evalue=6.2e-21 interpro_id=IPR001865 interpro_description=Ribosomal protein S2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 7 items

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