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ACD4_130

Alias: ACD4_79388.2637.11

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD4_130_1
ACD4, Gracilibacteria, Bacteria

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comp(1..159)
DNA (159bp) protein (53aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=18)
Pili subunits (db=superfamily db_id=SSF54523 from=1 to=53 evalue=6.3e-06)
transmembrane_regions 2..18 Tax=ACD4
ACD4_130_2
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(216..1922)
DNA (1707bp) protein (569aa)
seg (db=Seg db_id=seg from=355 to=372)
seg (db=Seg db_id=seg from=255 to=263)
seg 255..263 Tax=ACD4
ACD4_130_3
ACD4, Gracilibacteria, Bacteria

Not on your lists

comp(1972..2163)
DNA (192bp) protein (64aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=9 to=32 evalue=3.2e-05 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 10..32 Tax=ACD4
ACD4_130_4
ACD4, Gracilibacteria, Bacteria

Not on your lists

2302..2673
DNA (372bp) protein (124aa)
Ku protein
SPOC domain-like (db=superfamily db_id=SSF100939 from=1 to=124 evalue=1.3e-20 interpro_id=IPR016194 interpro_description=Spen Paralogue and Orthologue SPOC, C-terminal-like GO=Molecular Function: binding (GO:0005488))
Ku (db=HMMPfam db_id=PF02735 from=13 to=116 evalue=1.2e-13 interpro_id=IPR006164 interpro_description=DNA helicase, ATP-dependent, Ku type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: double-strand break repair via nonhomologous end joining (GO:0006303))
Ku protein; K10979 DNA end-binding protein Ku Tax=ACD4
Displaying 4 items

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