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ACD50_89

Alias: ACD50_304971.9435.6

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_89_1
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

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1..228
DNA (228bp) protein (76aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase (db=superfamily db_id=SSF55973 from=2 to=74 evalue=1.5e-20 interpro_id=IPR022636 interpro_description=S-adenosylmethionine synthetase superfamily)
S-ADENOSYLMETHIONINE SYNTHETASE (db=HMMPanther db_id=PTHR11964 from=2 to=74 evalue=3.5e-20 interpro_id=IPR002133 interpro_description=S-adenosylmethionine synthetase GO=Molecular Function: methionine adenosyltransferase activity (GO:0004478), Molecular Function: ATP binding (GO:0005524), Biological Process: one-carbon metabolic process (GO:0006730))
S-AdoMet_synt_C (db=HMMPfam db_id=PF02773 from=2 to=73 evalue=2.0e-18 interpro_id=IPR022630 interpro_description=S-adenosylmethionine synthetase, C-terminal)
ACD50_89_2
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

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354..1397
DNA (1044bp) protein (348aa)
hypothetical protein
seg (db=Seg db_id=seg from=130 to=141)
seg (db=Seg db_id=seg from=57 to=69)
coiled-coil (db=Coil db_id=coil from=92 to=120 evalue=NA)
ACD50_89_3
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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comp(1394..1528)
DNA (135bp) protein (45aa)
1394..1528 - (rbs_motif=ATAAT rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR24913.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_4
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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comp(1800..2207)
DNA (408bp) protein (136aa)
Mg2 transporter protein CorA family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
seg (db=Seg db_id=seg from=117 to=124)
coiled-coil (db=Coil db_id=coil from=27 to=55 evalue=NA)
ACD50_89_5
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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3057..3401
DNA (345bp) protein (115aa)
Putative zinc ribbon domain
seg (db=Seg db_id=seg from=67 to=72)
hypothetical protein alias=ACD50_C00089G00005,ACD50_304971.9435.6G0005,ACD50_304971.9435.6_5 id=72164 tax=ACD50 species=Methanobrevibacter smithii genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR24915.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_6
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

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3395..4057
DNA (663bp) protein (221aa)
hypothetical protein
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CSH2_PAESJ (db=UNIREF evalue=7.0e-11 bit_score=70.9 identity=30.0 coverage=69.2307692307692)
seg (db=Seg db_id=seg from=25 to=50)
coiled-coil (db=Coil db_id=coil from=177 to=214 evalue=NA)
ACD50_89_7
RLO_OP11_Levybacteria_39_17, Levybacteria, Microgenomates, Bacteria

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4108..4254
DNA (147bp) protein (49aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions 15..37 Tax=RIFCSPLOWO2_12_FULL_OP11_Levybacteria_39_17_curated
ACD50_89_8
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

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4294..5046
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=uncultured marine bacterium 580 RepID=Q6SFL1_9BACT (db=UNIREF evalue=5.0e-65 bit_score=251.0 identity=51.05 coverage=94.4223107569721)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKR49943.1}; TaxID=1618458 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWA2_40_16.;"
ACD50_89_9
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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5379..5744
DNA (366bp) protein (122aa)
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
coiled-coil (db=Coil db_id=coil from=29 to=57 evalue=NA)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKR24918.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_10
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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5746..6147
DNA (402bp) protein (134aa)
seg (db=Seg db_id=seg from=29 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
Uncharacterized protein {ECO:0000313|EMBL:KKR24919.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_11
Microgenomates bacterium GW2011_GWC1_39_7, Microgenomates, Bacteria

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6700..6939
DNA (240bp) protein (80aa)
seg (db=Seg db_id=seg from=53 to=70)
Uncharacterized protein {ECO:0000313|EMBL:KKR27215.1}; TaxID=1618515 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_39_7.;"
ACD50_89_12
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

Not on your lists

6936..7208
DNA (273bp) protein (91aa)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKR24920.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_13
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

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comp(7240..7668)
DNA (429bp) protein (143aa)
hypothetical protein
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=121 evalue=1.0e-09)
TIGR00305: probable toxin-antitoxin system (db=HMMTigr db_id=TIGR00305 from=2 to=117 evalue=6.9e-07 interpro_id=IPR002850 interpro_description=Protein of unknown function DUF132)
hypothetical protein alias=ACD50_304971.9435.6G0013,ACD50_C00089G00013,ACD50_304971.9435.6_13 id=72163 tax=ACD50 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
ACD50_89_14
GWA2_OP11_nov_40_16, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(7672..7944)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=76 to=88)
SpoVT_AbrB (db=HMMPfam db_id=PF04014 from=18 to=54 evalue=1.6e-08 interpro_id=IPR007159 interpro_description=Transcription regulator AbrB/SpoV, predicted)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=6 to=56 evalue=3.6e-08)
lp_hng_hel_AbrB: transcriptional regu (db=HMMTigr db_id=TIGR01439 from=12 to=54 evalue=4.6e-05 interpro_id=IPR006339 interpro_description=Transcription regulator AbrB)
ACD50_89_15
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8127..8426)
DNA (300bp) protein (100aa)
XRE family transcriptional regulator
HTH_3 (db=HMMPfam db_id=PF01381 from=43 to=89 evalue=6.7e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=40 to=95 evalue=1.7e-12 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=31 to=96 evalue=2.5e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD50_89_16
GWB1_OP11_39_7, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8423..8722)
DNA (300bp) protein (100aa)
hypothetical protein
Gp49 (db=HMMPfam db_id=PF05973 from=13 to=95 evalue=5.6e-18 interpro_id=IPR009241 interpro_description=Protein of unknown function DUF891)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=79 evalue=5.8e-07)
Uncharacterized protein {ECO:0000313|EMBL:KKR24924.1}; TaxID=1618464 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWB1_39_7.;"
ACD50_89_17

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comp(8757..9467)
DNA (711bp) protein (237aa)
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, putative n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VSX6_9CYAN (db=UNIREF evalue=7.0e-64 bit_score=247.0 identity=51.28 coverage=97.8902953586498)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
D_2_HYDROXYACID_DH_2 (db=PatternScan db_id=PS00670 from=95 to=117 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=124 to=140 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037))
Displaying 17 items

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