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ACD50_100

Alias: ACD50_30666.7901.9

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_100_1

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comp(2..505)
DNA (504bp) protein (168aa)
peptide methionine sulfoxide reductase msrA (EC:1.8.4.11)
Peptide methionine sulfoxide reductase (db=superfamily db_id=SSF55068 from=1 to=168 evalue=4.0e-72 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation reduction (GO:0055114))
msrA: peptide-methionine (S)-S-oxide reducta (db=HMMTigr db_id=TIGR00401 from=2 to=155 evalue=9.7e-71 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation reduction (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.30.1060.10 from=1 to=156 evalue=6.9e-63 interpro_id=IPR002569 interpro_description=Peptide methionine sulphoxide reductase MsrA GO=Molecular Function: oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor (GO:0016671), Biological Process: protein metabolic process (GO:0019538), Biological Process: oxidation reduction (GO:0055114))
ACD50_100_2
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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554..1495
DNA (942bp) protein (314aa)
Na+/Ca+ antiporter, CaCA family
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
seg (db=Seg db_id=seg from=296 to=308)
ACD50_100_3
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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1511..1678
DNA (168bp) protein (56aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=49)
seg (db=Seg db_id=seg from=15 to=34)
transmembrane_regions 15..49 Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
ACD50_100_4
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(1688..2254)
DNA (567bp) protein (189aa)
plsY; acyl-phosphate glycerol 3-phosphate acyltransferase (EC:2.3.1.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
ACD50_100_5
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(2257..2706)
DNA (450bp) protein (150aa)
GatB/Yqey domain protein
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
YqeY (db=HMMPfam db_id=PF09424 from=3 to=148 evalue=7.4e-52 interpro_id=IPR019004 interpro_description=Protein of unknown function YOR215C, mitochondrial)
GatB/YqeY motif (db=superfamily db_id=SSF89095 from=1 to=149 evalue=4.6e-42 interpro_id=IPR003789 interpro_description=Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO=Biological Process: translation (GO:0006412), Molecular Function: carbon-nitrogen ligase activity, with glutamine as amido-N-donor (GO:0016884))
ACD50_100_6
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(2728..4122)
DNA (1395bp) protein (465aa)
lepB; signal peptidase I (EC:3.4.21.89)
Signal peptidase IB n=1 Tax=Lactobacillus iners DSM 13335 RepID=C8PAJ5_9LACO (db=UNIREF evalue=7.0e-19 bit_score=99.0 identity=43.11 coverage=33.7634408602151)
seg (db=Seg db_id=seg from=7 to=20)
seg (db=Seg db_id=seg from=369 to=381)
ACD50_100_7
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(4119..5066)
DNA (948bp) protein (316aa)
seg (db=Seg db_id=seg from=262 to=273)
seg (db=Seg db_id=seg from=180 to=213)
seg (db=Seg db_id=seg from=26 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=278)
ACD50_100_8
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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5128..5481
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=43 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
ACD50_100_9
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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comp(5500..6861)
DNA (1362bp) protein (454aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
PolyA polymerase family protein n=1 Tax=Treponema denticola RepID=Q73NW9_TREDE (db=UNIREF evalue=2.0e-90 bit_score=336.0 identity=43.05 coverage=96.2555066079295)
TRNA NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR13734:SF7 from=38 to=427 evalue=4.2e-63)
ACD50_100_10
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

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6892..7935
DNA (1044bp) protein (348aa)
recJ; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=55 to=348 evalue=7.0e-72)
DHH (db=HMMPfam db_id=PF01368 from=67 to=211 evalue=1.6e-17 interpro_id=IPR001667 interpro_description=Phosphoesterase, RecJ-like GO=Molecular Function: hydrolase activity (GO:0016787), Molecular Function: manganese ion binding (GO:0030145))
recJ; single-stranded-DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
Displaying 10 items

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