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ACD50_156

Alias: ACD50_268281.2484.5

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD50_156_1

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3..839
DNA (837bp) protein (279aa)
DNA primase
DNA primase n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20C6 (db=UNIREF evalue=4.0e-09 bit_score=65.5 identity=26.0 coverage=51.6129032258064)
seg (db=Seg db_id=seg from=173 to=184)
coiled-coil (db=Coil db_id=coil from=242 to=263 evalue=NA)
ACD50_156_2
CG_CPR16-01, CG_CPR16, Bacteria

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779..1909
DNA (1131bp) protein (377aa)
RNA polymerase, sigma 70 subunit, rpod subfamily
seg (db=Seg db_id=seg from=361 to=375)
seg (db=Seg db_id=seg from=347 to=359)
seg (db=Seg db_id=seg from=314 to=326)
ACD50_156_3

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2002..2160
DNA (159bp) protein (53aa)
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001742EF6 (db=UNIREF evalue=4.0e-15 bit_score=83.6 identity=76.47 coverage=94.3396226415094)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=12 to=38 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=1 to=40 evalue=1.0e-15 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD50_156_4

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2339..2518
DNA (180bp) protein (60aa)
seg (db=Seg db_id=seg from=4 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD65175.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 4 items

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