ggKbase home page

ACD52_57

Alias: ACD52_174025.4216.7

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_57_1
GWF1_OP11_44_10, Microgenomates, Bacteria

Not on your lists

comp(2..1525)
DNA (1524bp) protein (508aa)
hypothetical protein (db=KEGG evalue=1.0e-11 bit_score=75.1 identity=22.75 coverage=71.8503937007874)
seg (db=Seg db_id=seg from=62 to=74)
N-acetylmuramoyl-L-alanine amidase-like (db=superfamily db_id=SSF55846 from=387 to=508 evalue=1.2e-17 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
Amidase_2 (db=HMMPfam db_id=PF01510 from=408 to=507 evalue=8.7e-15 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
ACD52_57_2
GWF1_OP11_44_10, Microgenomates, Bacteria

Not on your lists

comp(1476..1787)
DNA (312bp) protein (104aa)
RNA-binding protein (Contains KH domain)-like protein (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSZ2_9BACT (db=UNIREF evalue=2.0e-09 bit_score=64.3 identity=40.0 coverage=66.3461538461538)
KH_1 (db=HMMPfam db_id=PF00013 from=37 to=64 evalue=3.3e-05 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
Uncharacterized protein {ECO:0000313|EMBL:KKT31454.1}; TaxID=1618537 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF1_44_10.;"
hypothetical protein
ACD52_57_3
GWF1_OP11_44_10, Microgenomates, Bacteria

Not on your lists

comp(1804..2382)
DNA (579bp) protein (193aa)
hypothetical protein (db=KEGG evalue=3.0e-08 bit_score=61.2 identity=35.51 coverage=51.8134715025907)
hypothetical protein alias=ACD52_C00057G00003,ACD52_174025.4216.7G0003,ACD52_174025.4216.7_3 id=75102 tax=ACD52 species=Thermoanaerobacter italicus genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKT31453.1}; TaxID=1618537 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF1_44_10.;"
ACD52_57_4
GWF1_OP11_44_10, Microgenomates, Bacteria

Not on your lists

comp(2388..2684)
DNA (297bp) protein (99aa)
2388..2684 - (rbs_motif=TAA rbs_spacer=12bp)
Tax=GWF1_OP11_44_10
ACD52_57_5
GWF1_OP11_44_10, Microgenomates, Bacteria

Not on your lists

comp(2697..3332)
DNA (636bp) protein (212aa)
seg (db=Seg db_id=seg from=165 to=185)
seg (db=Seg db_id=seg from=41 to=76)
coiled-coil (db=Coil db_id=coil from=162 to=186 evalue=NA)
SAP (db=ProfileScan db_id=PS50800 from=10 to=44 evalue=9.447 interpro_id=IPR003034 interpro_description=DNA-binding SAP GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD52_57_6
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(3496..4248)
DNA (753bp) protein (251aa)
hypothetical protein (db=KEGG evalue=3.0e-16 bit_score=88.6 identity=26.88 coverage=92.8286852589641)
hypothetical protein alias=ACD52_C00057G00006,ACD52_174025.4216.7G0006,ACD52_174025.4216.7_6 id=75104 tax=ACD52 species=Nematostella vectensis genus=Nematostella taxon_order=Actiniaria taxon_class=Anthozoa phylum=Cnidaria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKU60581.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
Displaying 6 items

View Taxonomy