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ACD52_150

Alias: ACD52p_177027.11762.8

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_150_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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2..1450
DNA (1449bp) protein (483aa)
2..1450 + ( gc_cont=0.439)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_150_2

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1655..1789
DNA (135bp) protein (45aa)
1655..1789 + ( gc_cont=0.526)
Uncharacterized protein {ECO:0000313|EMBL:EKD62058.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD52_150_3

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comp(2581..3135)
DNA (555bp) protein (185aa)
ribosome recycling factor
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA)
RIBOSOME RECYCLING FACTOR (RIBOSOME RELEASING FACTOR) (RRF) (db=HMMPanther db_id=PTHR20982:SF3 from=8 to=184 evalue=1.2e-56)
RIBOSOME RECYCLING FACTOR (db=HMMPanther db_id=PTHR20982 from=8 to=184 evalue=1.2e-56 interpro_id=IPR002661 interpro_description=Ribosome recycling factor GO=Biological Process: translation (GO:0006412))
ACD52_150_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

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comp(3181..3660)
DNA (480bp) protein (160aa)
translation elongation factor EFTs/EF1B dimerization
Elongation factor Ts (EF-Ts), dimerisation domain (db=superfamily db_id=SSF54713 from=59 to=158 evalue=5.2e-28 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
no description (db=Gene3D db_id=G3DSA:3.30.479.20 from=62 to=157 evalue=8.3e-25 interpro_id=IPR014039 interpro_description=Translation elongation factor EFTs/EF1B, dimerisation GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ELONGATION FACTOR TS (db=HMMPanther db_id=PTHR11741 from=7 to=155 evalue=2.1e-20 interpro_id=IPR001816 interpro_description=Translation elongation factor EFTs/EF1B GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: intracellular (GO:0005622), Biological Process: translational elongation (GO:0006414))
ACD52_150_5

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comp(3657..4400)
DNA (744bp) protein (248aa)
30S ribosomal protein S2
seg (db=Seg db_id=seg from=2 to=11)
seg (db=Seg db_id=seg from=228 to=247)
rpsB_bact: ribosomal protein S2 (db=HMMTigr db_id=TIGR01011 from=4 to=224 evalue=6.6e-76 interpro_id=IPR005706 interpro_description=Ribosomal protein S2, bacteria/mitochondria/plastid GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD52_150_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(4446..5285)
DNA (840bp) protein (280aa)
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC:3.5.4.9)
seg (db=Seg db_id=seg from=245 to=257)
seg (db=Seg db_id=seg from=65 to=81)
METHYLENETETRAHYDROFOLATE DEHYDROGENASE FAMILY MEMBER (db=HMMPanther db_id=PTHR10025 from=12 to=266 evalue=1.5e-44)
ACD52_150_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(5303..6577)
DNA (1275bp) protein (425aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
seg (db=Seg db_id=seg from=225 to=236)
ACD52_150_8

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comp(6564..7520)
DNA (957bp) protein (319aa)
ribokinase-like domain-containing protein
PFKB_KINASES_1 (db=PatternScan db_id=PS00583 from=48 to=72 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site GO=Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
PFKB_KINASES_2 (db=PatternScan db_id=PS00584 from=248 to=261 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site GO=Molecular Function: phosphotransferase activity, alcohol group as acceptor (GO:0016773))
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=299 evalue=3.3e-47)
ACD52_150_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7520..8827)
DNA (1308bp) protein (436aa)
glyA; serine hydroxymethyltransferase
glyA; serine hydroxymethyltransferase
coiled-coil (db=Coil db_id=coil from=281 to=302 evalue=NA)
ACD52_150_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9192..9365)
DNA (174bp) protein (58aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=25 to=54 evalue=1.8e-08)
P-loop containing nucleoside triphosphate hydrolases Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_150_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(9365..11137)
DNA (1773bp) protein (591aa)
thymidylate synthase complementing protein ThyX
thymidylate synthase complementing protein ThyX
seg (db=Seg db_id=seg from=449 to=460)
ACD52_150_12

Not on your lists

comp(11137..11700)
DNA (564bp) protein (188aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Aeromicrobium marinum DSM 15272 RepID=E2SF59_9ACTO (db=UNIREF evalue=2.0e-52 bit_score=208.0 identity=50.0 coverage=98.936170212766)
deoxycytidine triphosphate deaminase
dCTP_deam: deoxycytidine triphosphate deami (db=HMMTigr db_id=TIGR02274 from=2 to=181 evalue=7.8e-81 interpro_id=IPR011962 interpro_description=Deoxycytidine triphosphate deaminase GO=Biological Process: dUTP biosynthetic process (GO:0006229), Molecular Function: dCTP deaminase activity (GO:0008829))
no description (db=Gene3D db_id=G3DSA:2.70.40.10 from=1 to=184 evalue=7.5e-54)
Displaying 12 items

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