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ACD52_152

Alias: ACD52p_6083.12652.9

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD52_152_1
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(294..932)
DNA (639bp) protein (213aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=161 to=179)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ACD52_152_2
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

962..1498
DNA (537bp) protein (179aa)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=170 evalue=9.3e-10)
P-loop containing nucleoside triphosphate hydrolases Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_152_3
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(1575..1958)
DNA (384bp) protein (128aa)
seg (db=Seg db_id=seg from=82 to=95)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=126 evalue=1.2e-15)
(db=HMMPfam db_id=PF00903 from=4 to=121 evalue=5.3e-06 interpro_id=IPR004360 interpro_description=Glyoxalase/fosfomycin resistance/dioxygenase)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=5 to=123 evalue=8.9e-05)
ACD52_152_4
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2037..2696
DNA (660bp) protein (220aa)
cAMP-binding protein
cAMP-binding domain-like (db=superfamily db_id=SSF51206 from=6 to=134 evalue=8.5e-23 interpro_id=IPR018490 interpro_description=Cyclic nucleotide-binding-like)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=135 to=214 evalue=3.8e-18)
(db=HMMPfam db_id=PF00027 from=20 to=107 evalue=1.2e-14 interpro_id=IPR000595 interpro_description=Cyclic nucleotide-binding domain)
ACD52_152_5
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

2848..3249
DNA (402bp) protein (134aa)
hypothetical protein
SET domain (db=superfamily db_id=SSF82199 from=5 to=120 evalue=1.2e-16)
Protein methyltransferase, PBCV type (db=HMMPIR db_id=PIRSF022536 from=1 to=133 evalue=1.3e-15 interpro_id=IPR009207 interpro_description=Histone methyltransferase, PBCV type putative)
(db=HMMPfam db_id=PF00856 from=21 to=118 evalue=4.9e-10 interpro_id=IPR001214 interpro_description=SET domain GO=Molecular Function: protein binding (GO:0005515))
ACD52_152_6
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

3332..4081
DNA (750bp) protein (250aa)
3332..4081 + ( gc_cont=0.355)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_152_7
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

4234..5991
DNA (1758bp) protein (586aa)
hypothetical protein
hypothetical protein
ABC superfamily ATP binding cassette transporter, membrane protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VUP5_9CORY (db=UNIREF evalue=4.0e-114 bit_score=416.0 identity=40.03 coverage=99.4880546075085)
seg (db=Seg db_id=seg from=440 to=456)
ACD52_152_8
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

6520..7686
DNA (1167bp) protein (389aa)
ATP-dependent RNA helicase RhlE
ATP-dependent RNA helicase RhlE
DEAD BOX ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967 from=47 to=388 evalue=1.2e-142)
ATP-DEPENDENT RNA HELICASE (db=HMMPanther db_id=PTHR10967:SF51 from=47 to=388 evalue=1.2e-142)
ACD52_152_9
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(7679..8230)
DNA (552bp) protein (184aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN0_9EURY (db=UNIREF evalue=8.0e-31 bit_score=136.0 identity=40.8 coverage=92.3913043478261)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=1 to=182 evalue=2.1e-32)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=180 evalue=4.3e-25)
ACD52_152_10
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

8744..9253
DNA (510bp) protein (170aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Sulfuricurvum kujiense DSM 16994 RepID=E4U1Q8_SULKY (db=UNIREF evalue=2.0e-17 bit_score=91.7 identity=34.97 coverage=89.4117647058824)
Uracil-DNA glycosylase-like (db=superfamily db_id=SSF52141 from=6 to=165 evalue=1.3e-16 interpro_id=IPR005122 interpro_description=Uracil-DNA glycosylase-like)
no description (db=Gene3D db_id=G3DSA:3.40.470.10 from=6 to=164 evalue=9.0e-06 interpro_id=IPR005122 interpro_description=Uracil-DNA glycosylase-like)
ACD52_152_11
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

9683..10042
DNA (360bp) protein (120aa)
9683..10042 + ( gc_cont=0.375)
hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_152_12
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10093..10473
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP family protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB10_9SPHI (db=UNIREF evalue=6.0e-29 bit_score=129.0 identity=50.0 coverage=97.6377952755905)
endoribonuclease L-PSP
TIGR00004: putative endoribonuclease L-PSP (db=HMMTigr db_id=TIGR00004 from=2 to=125 evalue=1.9e-50 interpro_id=IPR006056 interpro_description=YjgF-like protein)
YjgF-like (db=superfamily db_id=SSF55298 from=2 to=126 evalue=3.9e-40 interpro_id=IPR013813 interpro_description=Endoribonuclease L-PSP/chorismate mutase-like)
ACD52_152_13
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

10477..10983
DNA (507bp) protein (169aa)
hypothetical protein
NUDIX hydrolase n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CR98_PAESJ (db=UNIREF evalue=2.0e-19 bit_score=98.6 identity=32.43 coverage=85.7988165680473)
Nudix (db=superfamily db_id=SSF55811 from=16 to=136 evalue=1.7e-20 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
(db=HMMPfam db_id=PF00293 from=23 to=138 evalue=4.2e-15 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD52_152_14
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11020..11301
DNA (282bp) protein (94aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNK3_9DELT (db=UNIREF evalue=1.0e-29 bit_score=132.0 identity=67.03 coverage=95.7446808510638)
(db=HMMPfam db_id=PF04365 from=7 to=82 evalue=7.8e-22 interpro_id=IPR007460 interpro_description=Protein of unknown function DUF497)
hypothetical protein; K09803 hypothetical protein Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_152_15
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11279..11512
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YE58_9DELT (db=UNIREF evalue=4.0e-17 bit_score=90.5 identity=57.33 coverage=93.5897435897436)
helix-turn-helix protein CopG
helix-turn-helix protein CopG Tax=RBG_16_RIF_OP11_02_41_13_curated
ACD52_152_16
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

11575..12198
DNA (624bp) protein (208aa)
peptidase, S51 family (EC:3.4.13.21)
Peptidase E n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WBK8_9ACTO (db=UNIREF evalue=2.0e-19 bit_score=99.0 identity=30.98 coverage=85.0961538461538)
(db=HMMPfam db_id=PF03575 from=45 to=198 evalue=4.1e-25 interpro_id=IPR005320 interpro_description=Peptidase S51 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
no description (db=Gene3D db_id=G3DSA:3.40.50.880 from=1 to=204 evalue=7.3e-25)
ACD52_152_17
RBG_16_RIF_OP11_02_41_13_curated, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(12256..12690)
DNA (435bp) protein (145aa)
aldo/keto reductase
seg (db=Seg db_id=seg from=36 to=44)
NAD(P)-linked oxidoreductase (db=superfamily db_id=SSF51430 from=1 to=139 evalue=5.7e-22 interpro_id=IPR023210 interpro_description=NADP-dependent oxidoreductase domain)
(db=HMMPfam db_id=PF00248 from=2 to=133 evalue=1.3e-18 interpro_id=IPR023210 interpro_description=NADP-dependent oxidoreductase domain)
Displaying 17 items

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