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ACD53_605

Alias: ACD53p_69625.2231.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_605_1
CG_Arma_02, Armatimonadetes, Bacteria

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2..448
DNA (447bp) protein (149aa)
ABC-type transport system, involved in lipoprotein release, permease component
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O28455_ARCFU (db=UNIREF evalue=9.0e-22 bit_score=105.0 identity=39.16 coverage=95.3020134228188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
ACD53_605_2
CG_Arma_02, Armatimonadetes, Bacteria

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comp(468..1214)
DNA (747bp) protein (249aa)
Zinc/iron transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=39 to=53)
seg (db=Seg db_id=seg from=84 to=108)
ACD53_605_3
CG_Arma_02, Armatimonadetes, Bacteria

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comp(1279..1491)
DNA (213bp) protein (71aa)
RPB6/omega subunit-like (db=superfamily db_id=SSF63562 from=9 to=60 evalue=8.5e-06 interpro_id=IPR006110 interpro_description=RNA polymerase, subunit omega/K/RPABC2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
(db=HMMPfam db_id=PF01192 from=9 to=55 evalue=2.5e-05 interpro_id=IPR006110 interpro_description=RNA polymerase, subunit omega/K/RPABC2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
Tax=CG_Arma_02
ACD53_605_4
CG_Arma_02, Armatimonadetes, Bacteria

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comp(1520..1873)
DNA (354bp) protein (118aa)
regulatory protein MerR
coiled-coil (db=Coil db_id=coil from=79 to=107 evalue=NA)
no description (db=HMMSmart db_id=SM00422 from=10 to=79 evalue=4.5e-21 interpro_id=IPR000551 interpro_description=Transcription regulator HTH, MerR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=10 to=108 evalue=3.1e-17 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166))
ACD53_605_5
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(1915..2265)
DNA (351bp) protein (117aa)
molecular chaperone DnaJ
Chaperone protein DnaJ n=1 Tax=Bacillus pseudofirmus OF4 RepID=D3FXL2_BACPE (db=UNIREF evalue=6.0e-27 bit_score=123.0 identity=49.57 coverage=91.4529914529915)
DNAJ/HSP40 (db=HMMPanther db_id=PTHR11821 from=2 to=87 evalue=3.5e-29)
CHAPERONE PROTEIN DNAJ (db=HMMPanther db_id=PTHR11821:SF79 from=2 to=87 evalue=3.5e-29)
Displaying 5 items

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