Alias: ACD53_3158.11747.27
name | lists | location/seqs | annotations | notes |
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ACD53_101_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1..378
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cobA; cob(I)yrinate a,c-diamide adenosyltransferase
CobA_CobO_BtuR (db=HMMPfam db_id=PF02572 from=7 to=124 evalue=8.8e-36 interpro_id=IPR003724 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=16 to=125 evalue=1.7e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=19 to=125 evalue=1.6e-29)
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ACD53_101_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
390..794
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(R)-methylmalonyl-CoA mutase, adenosylcobamide-binding subunit
B12_BINDING (db=ProfileScan db_id=PS51332 from=5 to=133 evalue=0.0 interpro_id=IPR006158 interpro_description=Cobalamin (vitamin B12)-binding GO=Molecular Function: cobalamin binding (GO:0031419), Molecular Function: metal ion binding (GO:0046872))
PTHR23408 (db=HMMPanther db_id=PTHR23408 from=1 to=131 evalue=4.39999001237694e-64)
Cbl-bd (db=superfamily db_id=SSF52242 from=3 to=130 evalue=7.7e-52 interpro_id=IPR006158 interpro_description=Cobalamin (vitamin B12)-binding GO=Molecular Function: cobalamin binding (GO:0031419), Molecular Function: metal ion binding (GO:0046872))
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ACD53_101_3
unknown
|
Not on your lists |
761..859
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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ACD53_101_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
881..1840
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protein kinase, ArgK family
rbh
protein kinase, ArgK family
rbh
LAO/AO transport system ATPase n=1 Tax=Geobacter sulfurreducens RepID=Q74CU2_GEOSL (db=UNIREF evalue=1.0e-169 bit_score=598.0 identity=100.0 coverage=99.375)
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ACD53_101_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1919..2785
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peptidoglycan L,D-transpeptidase
rbh
peptidoglycan L,D-transpeptidase
rbh
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74CU1_GEOSL (db=UNIREF evalue=2.0e-158 bit_score=561.0 identity=100.0 coverage=99.3079584775086)
seg (db=Seg db_id=seg from=5 to=19)
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ACD53_101_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2840..4456
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PolyA polymerase family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74CU0_GEOSL (db=UNIREF evalue=0.0 bit_score=933.0 identity=99.79 coverage=87.9406307977737)
ccaA; adenosine-specific tRNA nucleotidyltransferase
ccaA; adenosine-specific tRNA nucleotidyltransferase
seg (db=Seg db_id=seg from=476 to=490)
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ACD53_101_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
4396..5526
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ccaA; adenosine-specific tRNA nucleotidyltransferase
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=1 to=323 evalue=5.3e-71)
TRNA NUCLEOTIDYL TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR13734:SF8 from=1 to=323 evalue=5.3e-71)
Poly A polymerase C-terminal region-like (db=superfamily db_id=SSF81891 from=103 to=365 evalue=1.0e-43)
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ACD53_101_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5563..6924)
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Adenosylmethionine--8-amino-7-oxononanoate aminotransferase n=1 Tax=Geobacter sulfurreducens RepID=Q74CT9_GEOSL (db=UNIREF evalue=0.0 bit_score=931.0 identity=100.0 coverage=99.5594713656388)
bioA; lysine--8-amino-7-oxononanoate aminotransferase
rbh
bioA; lysine--8-amino-7-oxononanoate aminotransferase
rbh
AA_TRANSFER_CLASS_3 (db=PatternScan db_id=PS00600 from=255 to=292 evalue=0.0 interpro_id=IPR005814 interpro_description=Aminotransferase class-III GO=Molecular Function: transaminase activity (GO:0008483), Molecular Function: pyridoxal phosphate binding (GO:0030170))
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ACD53_101_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6917..7387)
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bioD; dethiobiotin synthetase
seg (db=Seg db_id=seg from=45 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=142 evalue=4.4e-31)
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ACD53_101_10
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7675..8664)
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bioB; biotin synthase
rbh
bioB; biotin synthase
rbh
Biotin synthase n=1 Tax=Geobacter sulfurreducens RepID=BIOB_GEOSL (db=UNIREF evalue=0.0 bit_score=650.0 identity=100.0 coverage=99.3939393939394)
bioB (db=HMMTigr db_id=TIGR00433 from=18 to=322 evalue=7.0999832511256e-116 interpro_id=IPR002684 interpro_description=Biotin synthase GO=Molecular Function: biotin synthase activity (GO:0004076), Biological Process: biotin biosynthetic process (GO:0009102))
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ACD53_101_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
8896..9375
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Ribosome maturation factor rimP n=1 Tax=Geobacter sulfurreducens RepID=RIMP_GEOSL (db=UNIREF evalue=7.0e-85 bit_score=315.0 identity=100.0 coverage=98.75)
hypothetical protein
rbh
hypothetical protein
rbh
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ACD53_101_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9401..10558
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nusA; transcription elongation factor NusA
rbh
nusA; transcription elongation factor NusA
rbh
N utilization substance protein A n=1 Tax=Geobacter sulfurreducens RepID=Q74CT5_GEOSL (db=UNIREF evalue=0.0 bit_score=725.0 identity=100.0 coverage=92.2279792746114)
NusA (db=HMMTigr db_id=TIGR01953 from=6 to=344 evalue=0.0 interpro_id=IPR010213 interpro_description=Transcription termination factor NusA GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: transcription regulator activity (GO:0030528))
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ACD53_101_13
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
10562..11179
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Ribosomal protein L7Ae family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74CT4_GEOSL (db=UNIREF evalue=5.0e-112 bit_score=406.0 identity=100.0 coverage=99.0291262135922)
ylxRQ; RNA-binding protein YlxRQ
rbh
ylxRQ; RNA-binding protein YlxRQ
rbh
DUF448 (db=superfamily db_id=SSF64376 from=3 to=96 evalue=5.2e-26 interpro_id=IPR007393 interpro_description=Protein of unknown function DUF448)
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ACD53_101_14
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
11157..11792
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infB; translation initiation factor IF-2
Translation initiation factor IF-2 n=1 Tax=Geobacter sulfurreducens RepID=IF2_GEOSL (db=UNIREF evalue=6.0e-26 bit_score=120.0 identity=100.0 coverage=27.3584905660377)
seg (db=Seg db_id=seg from=60 to=160)
IF2_N (db=HMMPfam db_id=PF04760 from=1 to=46 evalue=2.3e-15 interpro_id=IPR006847 interpro_description=Translation initiation factor IF-2, N-terminal GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
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