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ACD53_317

Alias: ACD53_4056.8433.28

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_317_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..416
DNA (414bp) protein (138aa)
hypothetical protein
Membrane protein, putative n=2 Tax=Geobacter sulfurreducens RepID=Q74D31_GEOSL (db=UNIREF evalue=1.0e-62 bit_score=241.0 identity=100.0 coverage=88.4057971014493)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
ACD53_317_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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436..2307
DNA (1872bp) protein (624aa)
polyprenyl-phospho-glycoside--protein O-glycosyltransferase rbh
polyprenyl-phospho-glycoside--protein O-glycosyltransferase rbh
Membrane protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74D30_GEOSL (db=UNIREF evalue=0.0 bit_score=1090.0 identity=100.0 coverage=99.6794871794872)
DUF2723 (db=HMMPfam db_id=PF11028 from=39 to=214 evalue=4.9e-55 interpro_id=IPR021280 interpro_description=Protein of unknown function DUF2723)
ACD53_317_3
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2310..3170
DNA (861bp) protein (287aa)
aroE; shikimate 5-dehydrogenase rbh
aroE; shikimate 5-dehydrogenase rbh
Shikimate dehydrogenase n=1 Tax=Geobacter sulfurreducens RepID=AROE_GEOSL (db=UNIREF evalue=4.0e-147 bit_score=523.0 identity=100.0 coverage=99.3031358885017)
aroE (db=HMMTigr db_id=TIGR00507 from=8 to=285 evalue=2.7000136937899e-77 interpro_id=IPR011342 interpro_description=Quinate/shikimate 5-dehydrogenase GO=Molecular Function: shikimate 5-dehydrogenase activity (GO:0004764), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
ACD53_317_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3236..4942
DNA (1707bp) protein (569aa)
Type II secretion system protein E n=2 Tax=Geobacter RepID=Q39VU7_GEOMG (db=UNIREF evalue=0.0 bit_score=1097.0 identity=93.84 coverage=99.6485061511424)
pilB; type IV pilus biogenesis ATPase PilB rbh
pilB; type IV pilus biogenesis ATPase PilB rbh
T2SP_E (db=PatternScan db_id=PS00662 from=384 to=398 evalue=0.0 interpro_id=IPR001482 interpro_description=Type II secretion system protein E GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: transport (GO:0006810))
ACD53_317_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5070..6167
DNA (1098bp) protein (366aa)
Twitching motility protein PilT n=1 Tax=Geobacter sulfurreducens RepID=Q74D27_GEOSL (db=UNIREF evalue=0.0 bit_score=748.0 identity=100.0 coverage=99.4535519125683)
pilT-4; twitching motility pilus retraction protein rbh
pilT-4; twitching motility pilus retraction protein rbh
pilT_fam (db=HMMTigr db_id=TIGR01420 from=3 to=346 evalue=0.0 interpro_id=IPR006321 interpro_description=Pilus retraction protein PilT GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ACD53_317_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6204..7421
DNA (1218bp) protein (406aa)
pilC; type IV pilus inner membrane protein PilC rbh
pilC; type IV pilus inner membrane protein PilC rbh
Type IV pilus biogenesis protein PilC n=1 Tax=Geobacter sulfurreducens RepID=Q74D26_GEOSL (db=UNIREF evalue=0.0 bit_score=729.0 identity=100.0 coverage=99.5073891625616)
GSPII_F (db=HMMPfam db_id=PF00482 from=70 to=193 evalue=1.8e-26 interpro_id=IPR018076 interpro_description=Type II secretion system F domain)
ACD53_317_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7422..8486
DNA (1065bp) protein (355aa)
Sensor protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D25_GEOSL (db=UNIREF evalue=0.0 bit_score=708.0 identity=100.0 coverage=99.4366197183099)
pilS; sensor histidine kinase PilS, PAS domain-containing rbh
pilS; sensor histidine kinase PilS, PAS domain-containing rbh
coiled-coil (db=Coil db_id=coil from=185 to=206 evalue=NA)
Displaying 7 items

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