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ACD53_411

Alias: ACDUNK_41395.8050.18

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_411_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1505..1768)
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAR35797.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AK22_GEOSK
ACD53_411_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1998..3641)
DNA (1644bp) protein (548aa)
Methyl-accepting chemotaxis protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74AF3_GEOSL (db=UNIREF evalue=0.0 bit_score=1043.0 identity=97.44 coverage=97.0802919708029)
mvhV; methyl-accepting chemotaxis sensory transducer rbh
mvhV; methyl-accepting chemotaxis sensory transducer rbh
seg (db=Seg db_id=seg from=251 to=264)
ACD53_411_3
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3643..4017)
DNA (375bp) protein (125aa)
mvhP; methyl viologen-reducing hydrogenase maturation protease
hydrog_prot: hydrogenase maturation prote (db=HMMTigr db_id=TIGR00072 from=1 to=117 evalue=1.3e-19 interpro_id=IPR000671 interpro_description=Peptidase A31, hydrogen uptake protein GO=Molecular Function: enzyme activator activity (GO:0008047), Molecular Function: peptidase activity (GO:0008233))
HybD-like (db=superfamily db_id=SSF53163 from=1 to=121 evalue=3.9e-18)
HycI (db=HMMPfam db_id=PF01750 from=6 to=114 evalue=1.4e-17 interpro_id=IPR000671 interpro_description=Peptidase A31, hydrogen uptake protein GO=Molecular Function: enzyme activator activity (GO:0008047), Molecular Function: peptidase activity (GO:0008233))
ACD53_411_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4174..4629)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74AF5_GEOSL (db=UNIREF evalue=7.0e-83 bit_score=308.0 identity=100.0 coverage=98.6842105263158)
hypothetical protein rbh
hypothetical protein rbh
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AK19_GEOSK
ACD53_411_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4626..4877)
DNA (252bp) protein (84aa)
mvhF; methyl viologen-reducing hydrogenase-associated ferredoxin
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=2 to=31 evalue=0.0 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=33 to=63 evalue=0.0 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=43 to=54 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD53_411_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4877..6298)
DNA (1422bp) protein (474aa)
mvhL; methyl viologen-reducing hydrogenase, large subunit rbh
mvhL; methyl viologen-reducing hydrogenase, large subunit rbh
Nickel-dependent hydrogenase, large subunit n=2 Tax=Geobacter RepID=Q39QE1_GEOMG (db=UNIREF evalue=0.0 bit_score=861.0 identity=91.12 coverage=99.57805907173)
NI_HGENASE_L_2 (db=PatternScan db_id=PS00508 from=440 to=449 evalue=0.0 interpro_id=IPR018194 interpro_description=Nickel-dependent hydrogenase, large subunit, nickel binding site GO=Molecular Function: ferredoxin hydrogenase activity (GO:0008901), Molecular Function: nickel ion binding (GO:0016151), Biological Process: oxidation reduction (GO:0055114))
active site DPC confirmed kelly wrighton (12/12/12)
ACD53_411_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6276..7226)
DNA (951bp) protein (317aa)
mvhS; methyl viologen-reducing hydrogenase, small subunit rbh
mvhS; methyl viologen-reducing hydrogenase, small subunit rbh
F420-non-reducing hydrogenase subunit G n=2 Tax=Geobacter RepID=Q39QE2_GEOMG (db=UNIREF evalue=2.0e-166 bit_score=588.0 identity=93.67 coverage=99.3690851735016)
SSF56770 (db=superfamily db_id=SSF56770 from=1 to=252 evalue=4.6e-46)
ACD53_411_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7223..7735)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74AF9_GEOSL (db=UNIREF evalue=1.0e-96 bit_score=354.0 identity=100.0 coverage=98.8304093567251)
hypothetical protein rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAR35790.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
ACD53_411_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7738..8088)
DNA (351bp) protein (117aa)
mvhQ; scaffold protein CheW associated with MCPs of classes 40H and 40+24H
CheW (db=HMMPfam db_id=PF01584 from=2 to=107 evalue=1.5e-23 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
CheW-like (db=superfamily db_id=SSF50341 from=2 to=113 evalue=1.1e-20 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
no description (db=HMMSmart db_id=SM00260 from=1 to=104 evalue=9.1e-06 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
Displaying 9 items

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