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ACD53_413

Alias: ACDUNK_1225.17347.53

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_413_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..400)
DNA (399bp) protein (133aa)
seg (db=Seg db_id=seg from=30 to=45)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAR34886.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
ACD53_413_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..1417)
DNA (1122bp) protein (374aa)
glycosyltransferase rbh
glycosyltransferase rbh
Glycosyl transferase, group 1 family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D08_GEOSL (db=UNIREF evalue=0.0 bit_score=717.0 identity=100.0 coverage=99.4652406417112)
seg (db=Seg db_id=seg from=232 to=249)
ACD53_413_3
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1546..2340)
DNA (795bp) protein (265aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74CL7_GEOSL (db=UNIREF evalue=7.0e-156 bit_score=553.0 identity=100.0 coverage=99.2452830188679)
glycosyltransferase rbh
glycosyltransferase rbh
SSF53448 (db=superfamily db_id=SSF53448 from=2 to=237 evalue=1.8e-51)
ACD53_413_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2342..3295)
DNA (954bp) protein (318aa)
glycosyltransferase rbh
glycosyltransferase rbh
Glycosyl transferase, group 2 family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D09_GEOSL (db=UNIREF evalue=1.0e-172 bit_score=608.0 identity=100.0 coverage=97.1698113207547)
seg (db=Seg db_id=seg from=98 to=109)
ACD53_413_5
unknown

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comp(3279..3413)
DNA (135bp) protein (45aa)

This feature has no annotations

ACD53_413_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3413..4426)
DNA (1014bp) protein (338aa)
glycosyltransferase rbh
glycosyltransferase rbh
Glycosyl transferase, group 2 family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D10_GEOSL (db=UNIREF evalue=0.0 bit_score=662.0 identity=99.7 coverage=97.6331360946746)
seg (db=Seg db_id=seg from=52 to=62)
ACD53_413_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4416..5561)
DNA (1146bp) protein (382aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D11_GEOSL (db=UNIREF evalue=0.0 bit_score=792.0 identity=100.0 coverage=99.4764397905759)
Uncharacterized protein {ECO:0000313|EMBL:AAR34882.2}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
ACD53_413_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6635)
DNA (1035bp) protein (345aa)
xapJ; ADP-heptose--lipopolysaccharide heptosyltransferase rbh
xapJ; ADP-heptose--lipopolysaccharide heptosyltransferase rbh
Heptosyltransferase family protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74D12_GEOSL (db=UNIREF evalue=0.0 bit_score=657.0 identity=100.0 coverage=92.463768115942)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=34 to=326 evalue=5.1e-35)
ACD53_413_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6635..7594)
DNA (960bp) protein (320aa)
xapI; SAM-dependent methyltransferase, FkbM family rbh
xapI; SAM-dependent methyltransferase, FkbM family rbh
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D13_GEOSL (db=UNIREF evalue=8.0e-169 bit_score=596.0 identity=100.0 coverage=99.375)
fkbM_fam (db=HMMTigr db_id=TIGR01444 from=97 to=226 evalue=7.49999605851445e-11 interpro_id=IPR006342 interpro_description=Methyltransferase FkbM)
ACD53_413_10
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7591..8661)
DNA (1071bp) protein (357aa)
ABC transporter, ATP-binding protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D14_GEOSL (db=UNIREF evalue=0.0 bit_score=724.0 identity=99.72 coverage=99.4397759103641)
xapH; ABC transporter ATP-binding protein rbh
xapH; ABC transporter ATP-binding protein rbh
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=1 to=193 evalue=5.5e-87)
ACD53_413_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8931..9776)
DNA (846bp) protein (282aa)
xapG; ABC transporter membrane protein, ABC-2 family rbh
xapG; ABC transporter membrane protein, ABC-2 family rbh
ABC transporter, permease protein, ABC-2 family n=1 Tax=Geobacter sulfurreducens RepID=Q74D15_GEOSL (db=UNIREF evalue=3.0e-122 bit_score=441.0 identity=100.0 coverage=99.290780141844)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
ACD53_413_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9786..10688)
DNA (903bp) protein (301aa)
xapF; glycosyltransferase rbh
xapF; glycosyltransferase rbh
Glycosyl transferase, group 2 family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D16_GEOSL (db=UNIREF evalue=5.0e-174 bit_score=613.0 identity=100.0 coverage=99.3355481727575)
SSF53448 (db=superfamily db_id=SSF53448 from=31 to=222 evalue=1.8e-29)
ACD53_413_13
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10696..11550)
DNA (855bp) protein (285aa)
xapE; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase rbh
xapE; phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase rbh
Prenyltransferase, UbiA family n=1 Tax=Geobacter sulfurreducens RepID=Q74D17_GEOSL (db=UNIREF evalue=3.0e-143 bit_score=511.0 identity=100.0 coverage=99.2982456140351)
UbiA (db=HMMPfam db_id=PF01040 from=23 to=270 evalue=8.00000000000001e-20 interpro_id=IPR000537 interpro_description=UbiA prenyltransferase GO=Molecular Function: prenyltransferase activity (GO:0004659), Cellular Component: integral to membrane (GO:0016021))
ACD53_413_14
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11547..12458)
DNA (912bp) protein (304aa)
xapD; ABC transporter ATP-binding protein rbh
xapD; ABC transporter ATP-binding protein rbh
ABC transporter, ATP-binding protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D18_GEOSL (db=UNIREF evalue=6.0e-167 bit_score=590.0 identity=100.0 coverage=99.3421052631579)
ABC_TRANSPORTER_2 (db=ProfileScan db_id=PS50893 from=15 to=248 evalue=0.0 interpro_id=IPR003439 interpro_description=ABC transporter-like GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ACD53_413_15
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12472..13326)
DNA (855bp) protein (285aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q74D19_GEOSL (db=UNIREF evalue=6.0e-154 bit_score=546.0 identity=100.0 coverage=92.9824561403509)
seg (db=Seg db_id=seg from=2 to=14)
ACD53_413_16
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13326..14117)
DNA (792bp) protein (264aa)
xapB; hypothetical protein rbh
xapB; hypothetical protein rbh
Membrane protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74D20_GEOSL (db=UNIREF evalue=1.0e-118 bit_score=429.0 identity=100.0 coverage=99.2424242424242)
Membrane protein, putative {ECO:0000313|EMBL:AAR34873.1}; TaxID=243231 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfur
ACD53_413_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14114..15862)
DNA (1749bp) protein (583aa)
xapA; hypothetical protein rbh
xapA; hypothetical protein rbh
Membrane protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74D21_GEOSL (db=UNIREF evalue=0.0 bit_score=1100.0 identity=100.0 coverage=99.6569468267582)
TPR_REGION (db=ProfileScan db_id=PS50293 from=415 to=558 evalue=0.0 interpro_id=IPR013026 interpro_description=Tetratricopeptide repeat-containing)
ACD53_413_18
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16396..16611)
DNA (216bp) protein (72aa)
pilA-N; hypothetical protein
seg (db=Seg db_id=seg from=13 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=9 to=29 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD53_413_19
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16831..17409)
DNA (579bp) protein (193aa)
pilR; sigma-54-dependent transcriptional response regulator PilR
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=89 to=98 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=120 evalue=6.2e-24)
no description (db=Gene3D db_id=G3DSA:1.10.8.60 from=50 to=123 evalue=2.8e-13)
Displaying 19 items

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