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ACD53_425

Alias: ACDUNK_3106.11692.49

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_425_1
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..690)
DNA (690bp) protein (230aa)
nouF; NADH dehydrogenase I subunit F (EC:1.6.5.3); K00335 NADH dehydrogenase I subunit F [EC:1.6.5.3] (db=KEGG evalue=4.0e-131 bit_score=470.0 identity=100.0 coverage=99.1304347826087)
NADH dehydrogenase I, F subunit n=2 Tax=Geobacter RepID=Q39QB2_GEOMG (db=UNIREF evalue=4.0e-126 bit_score=453.0 identity=94.32 coverage=99.1304347826087)
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=87 to=98 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD53_425_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(731..3211)
DNA (2481bp) protein (827aa)
NADH dehydrogenase I subunit G; K00336 NADH dehydrogenase I subunit G [EC:1.6.5.3] (db=KEGG evalue=0.0 bit_score=1673.0 identity=100.0 coverage=99.7581620314389)
NADH dehydrogenase I, G subunit, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74GA2_GEOSL (db=UNIREF evalue=0.0 bit_score=1673.0 identity=100.0 coverage=99.7581620314389)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=187 to=198 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD53_425_3
Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3264..4310)
DNA (1047bp) protein (349aa)
nuoH-1; NADH dehydrogenase I subunit H (EC:1.6.5.3); K00337 NADH dehydrogenase I subunit H [EC:1.6.5.3] (db=KEGG evalue=0.0 bit_score=677.0 identity=100.0 coverage=99.4269340974212)
NADH-quinone oxidoreductase subunit H 2 n=2 Tax=Geobacter RepID=NUOH2_GEOMG (db=UNIREF evalue=6.0e-177 bit_score=623.0 identity=94.36 coverage=96.2750716332378)
COMPLEX1_ND1_2 (db=PatternScan db_id=PS00668 from=234 to=247 evalue=0.0 interpro_id=IPR018086 interpro_description=NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO=Cellular Component: membrane (GO:0016020), Biological Process: oxidation reduction (GO:0055114))
ACD53_425_4
Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4332..4730)
DNA (399bp) protein (133aa)
nuoI-1; NADH dehydrogenase I subunit I (EC:1.6.5.3); K00338 NADH dehydrogenase I subunit I [EC:1.6.5.3] (db=KEGG evalue=1.0e-72 bit_score=274.0 identity=100.0 coverage=98.4962406015038)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=90 to=101 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=42 to=71 evalue=0.0 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=81 to=110 evalue=0.0 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
ACD53_425_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4741..5244)
DNA (504bp) protein (168aa)
nouJ; NADH dehydrogenase I subunit J (EC:1.6.5.3); K00339 NADH dehydrogenase I subunit J [EC:1.6.5.3] (db=KEGG evalue=2.0e-73 bit_score=277.0 identity=100.0 coverage=98.8095238095238)
NADH dehydrogenase I, J subunit n=1 Tax=Geobacter sulfurreducens RepID=Q74G99_GEOSL (db=UNIREF evalue=2.0e-73 bit_score=277.0 identity=100.0 coverage=98.8095238095238)
Oxidored_q3 (db=HMMPfam db_id=PF00499 from=15 to=163 evalue=7.90000000000001e-24 interpro_id=IPR001457 interpro_description=NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Biological Process: oxidation reduction (GO:0055114))
ACD53_425_6
Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5263..5565)
DNA (303bp) protein (101aa)
nuoK; NADH dehydrogenase I subunit K (EC:1.6.5.3); K00340 NADH dehydrogenase I subunit K [EC:1.6.5.3] (db=KEGG evalue=7.0e-34 bit_score=145.0 identity=100.0 coverage=98.019801980198)
Oxidored_q2 (db=HMMPfam db_id=PF00420 from=7 to=99 evalue=4.10000000000001e-22 interpro_id=IPR001133 interpro_description=NADH:ubiquinone/quinone oxidoreductase, chain 4L GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: ATP synthesis coupled electron transport (GO:0042773), Biological Process: oxidation reduction (GO:0055114))
NADH-quinone oxidoreductase subunit K 1 n=4 Tax=Geobacter RepID=NUOK1_GEOSL
ACD53_425_7
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5619..7619)
DNA (2001bp) protein (667aa)
nuoL-1; NADH dehydrogenase I subunit L (EC:1.6.5.3); K00341 NADH dehydrogenase I subunit L [EC:1.6.5.3] (db=KEGG evalue=0.0 bit_score=1127.0 identity=100.0 coverage=99.7001499250375)
NADH dehydrogenase I, L subunit n=1 Tax=Geobacter sulfurreducens RepID=Q74G97_GEOSL (db=UNIREF evalue=0.0 bit_score=1127.0 identity=100.0 coverage=99.7001499250375)
PTHR22773 (db=HMMPanther db_id=PTHR22773 from=85 to=663 evalue=0.0)
ACD53_425_8
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7653..9221)
DNA (1569bp) protein (523aa)
Proton-translocating NADH-quinone oxidoreductase, chain M n=2 Tax=Geobacter RepID=Q39QB9_GEOMG (db=UNIREF evalue=0.0 bit_score=862.0 identity=91.62 coverage=95.4110898661568)
hypothetical protein
hypothetical protein
PTHR22773:SF40 (db=HMMPanther db_id=PTHR22773:SF40 from=85 to=486 evalue=0.0)
ACD53_425_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9256..10710)
DNA (1455bp) protein (485aa)
nuoN-1; NADH dehydrogenase I subunit N (EC:1.6.5.3); K00343 NADH dehydrogenase I subunit N [EC:1.6.5.3] (db=KEGG evalue=0.0 bit_score=863.0 identity=100.0 coverage=99.5876288659794)
NADH dehydrogenase I, N subunit n=1 Tax=Geobacter sulfurreducens RepID=Q74G95_GEOSL (db=UNIREF evalue=0.0 bit_score=863.0 identity=100.0 coverage=99.5876288659794)
NDH_I_N (db=HMMTigr db_id=TIGR01770 from=11 to=475 evalue=0.0 interpro_id=IPR010096 interpro_description=NADH-quinone oxidoreductase, chain N GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Biological Process: ATP synthesis coupled electron transport (GO:0042773), Biological Process: oxidation reduction (GO:0055114))
ACD53_425_10
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10879..11394)
DNA (516bp) protein (172aa)
psaD; thiol peroxidase (EC:1.11.1.-); K11065 thiol peroxidase, atypical 2-Cys peroxiredoxin [EC:1.11.1.15] (db=KEGG evalue=1.0e-94 bit_score=347.0 identity=100.0 coverage=98.8372093023256)
Thiol peroxidase n=1 Tax=Geobacter sulfurreducens RepID=Q74G94_GEOSL (db=UNIREF evalue=2.0e-94 bit_score=347.0 identity=100.0 coverage=98.8372093023256)
THIOREDOXIN_2 (db=ProfileScan db_id=PS51352 from=22 to=171 evalue=0.0 interpro_id=IPR017936 interpro_description=Thioredoxin-like GO=Biological Process: cell redox homeostasis (GO:0045454))
ACD53_425_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11533..11754)
DNA (222bp) protein (74aa)
hypothetical protein (db=KEGG evalue=6.0e-34 bit_score=145.0 identity=100.0 coverage=98.6486486486486)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Membrane protein YqaA n=2 Tax=Geobacter sulfurreducens RepID=D7AEA0_GEOSK
Displaying 11 items

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