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ACD53_436

Alias: ACDUNK_12186.16389.25

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD53_436_1
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..482)
DNA (480bp) protein (160aa)
RND family efflux pump membrane fusion lipoprotein
seg (db=Seg db_id=seg from=6 to=22)
seg (db=Seg db_id=seg from=107 to=129)
coiled-coil (db=Coil db_id=coil from=112 to=140 evalue=NA)
ACD53_436_2
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(479..1120)
DNA (642bp) protein (214aa)
Transcriptional regulator, TetR family n=1 Tax=Geobacter sulfurreducens RepID=Q749S6_GEOSL (db=UNIREF evalue=2.0e-120 bit_score=434.0 identity=100.0 coverage=99.0654205607477)
TetR family transcriptional regulator rbh
TetR family transcriptional regulator rbh
HTH_TETR_2 (db=ProfileScan db_id=PS50977 from=14 to=74 evalue=0.0 interpro_id=IPR001647 interpro_description=Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD53_436_3
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1357..2853)
DNA (1497bp) protein (499aa)
sensory box histidine kinase (db=KEGG evalue=0.0 bit_score=957.0 identity=100.0 coverage=99.5991983967936)
Sensor protein n=1 Tax=Geobacter sulfurreducens RepID=Q749S5_GEOSL (db=UNIREF evalue=0.0 bit_score=957.0 identity=100.0 coverage=99.5991983967936)
PAS (db=ProfileScan db_id=PS50112 from=102 to=173 evalue=0.0 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165))
ACD53_436_4
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2837..3118)
DNA (282bp) protein (94aa)
hypothetical protein (db=KEGG evalue=5.0e-39 bit_score=162.0 identity=100.0 coverage=97.8723404255319)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7ALI1_GEOSK
ACD53_436_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..4146)
DNA (1032bp) protein (344aa)
sensor histidine kinase (db=KEGG evalue=0.0 bit_score=639.0 identity=100.0 coverage=99.4186046511628)
Sensor protein n=1 Tax=Geobacter sulfurreducens RepID=Q749S3_GEOSL (db=UNIREF evalue=0.0 bit_score=639.0 identity=100.0 coverage=99.4186046511628)
HIS_KIN (db=ProfileScan db_id=PS50109 from=132 to=343 evalue=0.0 interpro_id=IPR005467 interpro_description=Signal transduction histidine kinase, core GO=Molecular Function: two-component sensor activity (GO:0000155), Molecular Function: protein histidine kinase activity (GO:0004673), Biological Process: signal transduction (GO:0007165), Biological Process: peptidyl-histidine phosphorylation (GO:0018106))
ACD53_436_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4232..5137)
DNA (906bp) protein (302aa)
LuxR family transcriptional regulator rbh
LuxR family transcriptional regulator rbh
Transcriptional regulator, LuxR family n=1 Tax=Geobacter sulfurreducens RepID=Q749S2_GEOSL (db=UNIREF evalue=2.0e-132 bit_score=475.0 identity=100.0 coverage=99.3377483443709)
seg (db=Seg db_id=seg from=88 to=99)
ACD53_436_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5880..7487)
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749S1_GEOSL (db=UNIREF evalue=0.0 bit_score=1044.0 identity=100.0 coverage=94.0298507462687)
hypothetical protein (db=KEGG evalue=0.0 bit_score=1044.0 identity=100.0 coverage=94.0298507462687)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=Q749S1_GEOSL
ACD53_436_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7734..8084)
DNA (351bp) protein (117aa)
hypothetical protein (db=KEGG evalue=7.0e-62 bit_score=238.0 identity=99.14 coverage=98.2905982905983)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7ALI5_GEOSK
ACD53_436_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8120..9460)
DNA (1341bp) protein (447aa)
hypothetical protein (db=KEGG evalue=0.0 bit_score=879.0 identity=100.0 coverage=99.5525727069351)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749R9_GEOSL (db=UNIREF evalue=0.0 bit_score=879.0 identity=100.0 coverage=99.5525727069351)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=Q749R9_GEOSL
ACD53_436_10
unknown

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comp(9837..11426)
DNA (1590bp) protein (530aa)
seg (db=Seg db_id=seg from=488 to=501)
seg (db=Seg db_id=seg from=451 to=467)
seg (db=Seg db_id=seg from=326 to=337)
seg (db=Seg db_id=seg from=232 to=247)
ACD53_436_11
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11727..13301)
DNA (1575bp) protein (525aa)
hypothetical protein (db=KEGG evalue=0.0 bit_score=1077.0 identity=100.0 coverage=99.6190476190476)
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749R8_GEOSL (db=UNIREF evalue=0.0 bit_score=1077.0 identity=100.0 coverage=99.6190476190476)
coiled-coil (db=Coil db_id=coil from=262 to=297 evalue=NA)
coiled-coil (db=Coil db_id=coil from=203 to=224 evalue=NA)
ACD53_436_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13513..15606)
DNA (2094bp) protein (698aa)
C1 family peptidase domain-containing protein rbh
C1 family peptidase domain-containing protein rbh
Putative uncharacterized protein n=1 Tax=Geobacter sulfurreducens RepID=Q749R7_GEOSL (db=UNIREF evalue=0.0 bit_score=1363.0 identity=100.0 coverage=98.4240687679083)
seg (db=Seg db_id=seg from=21 to=37)
ACD53_436_13
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15679..16434)
DNA (756bp) protein (252aa)
hypothetical protein rbh
hypothetical protein rbh
Membrane protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q749R6_GEOSL (db=UNIREF evalue=2.0e-88 bit_score=328.0 identity=100.0 coverage=92.8571428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
Displaying 13 items

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