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ACD58_54

Alias: ACD58_7704.19406.11

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD58_54_1

Not on your lists

comp(659..907)
DNA (249bp) protein (83aa)
659..907 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56073.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_2

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comp(1310..8212)
DNA (6903bp) protein (2301aa)
hypothetical protein
seg (db=Seg db_id=seg from=1197 to=1209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2016 to=2038)
seg (db=Seg db_id=seg from=1065 to=1073)
ACD58_54_3

Not on your lists

comp(8601..9326)
DNA (726bp) protein (242aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
seg (db=Seg db_id=seg from=15 to=33)
seg (db=Seg db_id=seg from=120 to=143)
Uncharacterized protein {ECO:0000313|EMBL:EKD56075.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_4

Not on your lists

comp(9425..10801)
DNA (1377bp) protein (459aa)
GDP-mannose 4,6 dehydratase ISS
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
seg (db=Seg db_id=seg from=9 to=23)
seg (db=Seg db_id=seg from=49 to=61)
ACD58_54_5

Not on your lists

comp(10861..11478)
DNA (618bp) protein (206aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=195)
seg (db=Seg db_id=seg from=103 to=117)
Uncharacterized protein {ECO:0000313|EMBL:EKD56077.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_6

Not on your lists

comp(11655..12749)
DNA (1095bp) protein (365aa)
group 1 glycosyl transferase
group 1 glycosyl transferase
Glycosyl transferase, group 1 n=3 Tax=Thermoanaerobacter RepID=B0K513_THEPX (db=UNIREF evalue=1.0e-91 bit_score=340.0 identity=49.59 coverage=98.0821917808219)
seg (db=Seg db_id=seg from=101 to=106)
ACD58_54_7

Not on your lists

comp(12850..14259)
DNA (1410bp) protein (470aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=290 to=304)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ACD58_54_8

Not on your lists

comp(14463..14663)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D1U6_9BACT (db=UNIREF evalue=2.0e-15 bit_score=85.1 identity=59.7 coverage=97.0149253731343)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD56080.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_9

Not on your lists

comp(14943..15776)
DNA (834bp) protein (278aa)
tRNA (guanine-N(1)-)-methyltransferase
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=275 evalue=1.5e-98 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=266 evalue=1.2e-76)
no description (db=Gene3D db_id=G3DSA:3.40.1280.10 from=1 to=181 evalue=5.0e-58)
ACD58_54_10

Not on your lists

comp(15895..16251)
DNA (357bp) protein (119aa)
hypothetical protein
RNA-binding protein (Contains KH domain)-like protein (Fragment) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSZ2_9BACT (db=UNIREF evalue=1.0e-19 bit_score=98.2 identity=64.0 coverage=62.1848739495798)
seg (db=Seg db_id=seg from=84 to=103)
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=6 to=65 evalue=4.4e-08 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723))
ACD58_54_11

Not on your lists


comp(16360..16821)
DNA (462bp) protein (154aa)
30S ribosomal protein S16
seg (db=Seg db_id=seg from=91 to=141)
coiled-coil (db=Coil db_id=coil from=84 to=142 evalue=NA)
RIBOSOMAL_S16 (db=PatternScan db_id=PS00732 from=2 to=11 evalue=0.0 interpro_id=IPR020592 interpro_description=Ribosomal protein S16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD58_54_12

Not on your lists

comp(16884..17813)
DNA (930bp) protein (310aa)
methionyl-tRNA formyltransferase
fmt: methionyl-tRNA formyltransferase (db=HMMTigr db_id=TIGR00460 from=4 to=306 evalue=4.2e-89 interpro_id=IPR005794 interpro_description=Methionyl-tRNA formyltransferase GO=Molecular Function: methionyl-tRNA formyltransferase activity (GO:0004479), Biological Process: translation (GO:0006412))
Formyltransferase (db=superfamily db_id=SSF53328 from=4 to=226 evalue=4.4e-58 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
no description (db=Gene3D db_id=G3DSA:3.40.50.170 from=1 to=225 evalue=3.3e-56 interpro_id=IPR002376 interpro_description=Formyl transferase, N-terminal GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: hydroxymethyl-, formyl- and related transferase activity (GO:0016742))
ACD58_54_13

Not on your lists

comp(18013..18339)
DNA (327bp) protein (109aa)
18013..18339 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56085.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_14

Not on your lists

comp(18362..18502)
DNA (141bp) protein (47aa)
18362..18502 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56086.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_54_15

Not on your lists

comp(18519..19028)
DNA (510bp) protein (170aa)
18519..19028 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56087.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD58_54_16

Not on your lists

comp(19039..19350)
DNA (312bp) protein (104aa)
hypothetical protein
Pyrophosphatase n=1 Tax=Enterococcus casseliflavus EC20 RepID=C9A5Y4_ENTCA (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=58.82 coverage=79.8076923076923)
all-alpha NTP pyrophosphatases (db=superfamily db_id=SSF101386 from=1 to=86 evalue=2.4e-15)
MazG (db=HMMPfam db_id=PF03819 from=31 to=87 evalue=4.5e-07 interpro_id=IPR004518 interpro_description=NTP pyrophosphohydrolase MazG, putative catalytic core)
Displaying 16 items

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