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ACD58_56

Alias: ACD58_5617.10699.10

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD58_56_1

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comp(1..777)
DNA (777bp) protein (259aa)
hydrogenase
seg (db=Seg db_id=seg from=83 to=93)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=203 to=214 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_2 (db=ProfileScan db_id=PS51379 from=192 to=224 evalue=8.945 interpro_id=IPR017896 interpro_description=4Fe-4S ferredoxin, iron-sulpur binding domain)
ACD58_56_2

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873..2018
DNA (1146bp) protein (382aa)
phosphoglycerate kinase (EC:2.7.2.3)
seg (db=Seg db_id=seg from=210 to=221)
Phosphoglycerate kinase (db=superfamily db_id=SSF53748 from=1 to=381 evalue=1.0e-93 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
PGK (db=HMMPfam db_id=PF00162 from=4 to=371 evalue=4.9e-93 interpro_id=IPR001576 interpro_description=Phosphoglycerate kinase GO=Molecular Function: phosphoglycerate kinase activity (GO:0004618), Biological Process: glycolysis (GO:0006096))
ACD58_56_3

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2062..2940
DNA (879bp) protein (293aa)
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Tagatose-bisphosphate aldolase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V3T3_9FIRM (db=UNIREF evalue=5.0e-60 bit_score=234.0 identity=45.0 coverage=91.4675767918089)
seg (db=Seg db_id=seg from=76 to=90)
ALDOLASE_CLASS_II_1 (db=PatternScan db_id=PS00602 from=92 to=104 evalue=0.0 interpro_id=IPR000771 interpro_description=Ketose-bisphosphate aldolase, class-II GO=Molecular Function: fructose-bisphosphate aldolase activity (GO:0004332), Biological Process: glycolysis (GO:0006096), Molecular Function: zinc ion binding (GO:0008270))
ACD58_56_4

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3101..4084
DNA (984bp) protein (328aa)
ribokinase (EC:2.7.1.15)
Putative sugar kinase n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB3_9BACT (db=UNIREF evalue=1.0e-36 bit_score=157.0 identity=31.11 coverage=93.5975609756098)
PFKB_KINASES_1 (db=PatternScan db_id=PS00583 from=54 to=78 evalue=0.0 interpro_id=IPR002173 interpro_description=Carbohydrate/puine kinase, PfkB, conserved site)
Ribokinase-like (db=superfamily db_id=SSF53613 from=1 to=313 evalue=1.0e-56)
ACD58_56_5

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4257..4649
DNA (393bp) protein (131aa)
ASCH domain-containing protein
PUA domain-like (db=superfamily db_id=SSF88697 from=3 to=128 evalue=4.3e-11 interpro_id=IPR015947 interpro_description=Pseudouridine synthase/archaeosine transglycosylase-like)
ASCH (db=HMMPfam db_id=PF04266 from=8 to=65 evalue=2.5e-05 interpro_id=IPR007374 interpro_description=ASCH domain)
hypothetical protein alias= id=86941 tax=ACD58 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=ACD58 organism_desc=ACD58
ACD58_56_6

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4694..5164
DNA (471bp) protein (157aa)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=5 to=155 evalue=6.2e-20)
FabA (db=HMMPfam db_id=PF07977 from=17 to=133 evalue=3.9e-14 interpro_id=IPR013114 interpro_description=Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=9 to=150 evalue=1.4e-12)
Uncharacterized protein {ECO:0000313|EMBL:EKD56194.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_56_7

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5210..5401
DNA (192bp) protein (64aa)
5210..5401 + (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56195.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_56_8

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5600..6808
DNA (1209bp) protein (403aa)
tig; trigger factor
coiled-coil (db=Coil db_id=coil from=137 to=158 evalue=NA)
seg (db=Seg db_id=seg from=148 to=156)
seg (db=Seg db_id=seg from=324 to=329)
ACD58_56_9

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6911..7498
DNA (588bp) protein (196aa)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SNF2_9FIRM (db=UNIREF evalue=7.0e-75 bit_score=283.0 identity=71.28 coverage=94.8979591836735)
Clp protease
CLP_PROTEASE_SER (db=PatternScan db_id=PS00381 from=95 to=106 evalue=0.0 interpro_id=IPR018215 interpro_description=Peptidase S14, ClpP, active site GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
CLP_protease (db=HMMPfam db_id=PF00574 from=20 to=195 evalue=1.7e-80 interpro_id=IPR001907 interpro_description=Peptidase S14, ClpP GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
ACD58_56_10

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7514..7681
DNA (168bp) protein (56aa)
7514..7681 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD56198.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_56_11

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7755..10673
DNA (2919bp) protein (973aa)
hypothetical protein
seg (db=Seg db_id=seg from=908 to=927)
seg (db=Seg db_id=seg from=808 to=821)
seg (db=Seg db_id=seg from=609 to=618)
Displaying 11 items

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