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ACD58_97

Alias: ACD58_19497.9528.9

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD58_97_1

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
1..243 - (rbs_motif=AGGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56854.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_97_2

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comp(520..696)
DNA (177bp) protein (59aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKD56855.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_97_3

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comp(907..1086)
DNA (180bp) protein (60aa)
907..1086 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56842.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_97_4

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comp(1194..2423)
DNA (1230bp) protein (410aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FPZ5_9FIRM (db=UNIREF evalue=1.0e-53 bit_score=214.0 identity=37.86 coverage=97.3170731707317)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=330 to=350)
ACD58_97_5

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comp(2477..2926)
DNA (450bp) protein (150aa)
2477..2926 - (rbs_motif=AGGAG rbs_spacer=3-4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD56844.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_97_6

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comp(3025..3690)
DNA (666bp) protein (222aa)
peptide ABC transporter ATPase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=144 to=158 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF32 from=5 to=221 evalue=7.4e-111)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=221 evalue=7.4e-111)
ACD58_97_7

Not on your lists

comp(3741..4796)
DNA (1056bp) protein (352aa)
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
seg (db=Seg db_id=seg from=298 to=314)
coiled-coil (db=Coil db_id=coil from=302 to=323 evalue=NA)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=11 to=294 evalue=2.0e-33)
ACD58_97_8

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comp(4856..5368)
DNA (513bp) protein (171aa)
hypothetical protein cdiviTM7_02774 n=2 Tax=candidate division TM7 RepID=UPI00016B269D (db=UNIREF evalue=5.0e-12 bit_score=73.6 identity=32.81 coverage=73.6842105263158)
PRC (db=HMMPfam db_id=PF05239 from=4 to=74 evalue=4.2e-07 interpro_id=IPR007903 interpro_description=PRC-barrel)
PRC-barrel domain (db=superfamily db_id=SSF50346 from=1 to=74 evalue=6.0e-06 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
PRC-barrel domain (db=superfamily db_id=SSF50346 from=88 to=156 evalue=0.0026 interpro_id=IPR011033 interpro_description=PRC-barrel-like)
ACD58_97_9

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comp(5489..6046)
DNA (558bp) protein (186aa)
elongation factor P
EFP (db=PatternScan db_id=PS01275 from=150 to=169 evalue=0.0 interpro_id=IPR013852 interpro_description=Translation elongation factor P/YeiP, conserved site)
efp: translation elongation factor P (db=HMMTigr db_id=TIGR00038 from=2 to=185 evalue=1.7e-97 interpro_id=IPR011768 interpro_description=Translation elongation factor P GO=Molecular Function: translation elongation factor activity (GO:0003746), Cellular Component: cytoplasm (GO:0005737), Biological Process: translational elongation (GO:0006414))
Translation elongation factor P (db=HMMPIR db_id=PIRSF005901 from=1 to=185 evalue=9.2e-54 interpro_id=IPR020599 interpro_description=Translation elongation factor P/YeiP)
ACD58_97_10

Not on your lists


comp(6169..6387)
DNA (219bp) protein (73aa)
30S ribosomal protein S18 n=1 Tax=Anaerobaculum hydrogeniformans ATCC BAA-1850 RepID=D3L2Z6_9BACT (db=UNIREF evalue=2.0e-14 bit_score=81.3 identity=57.81 coverage=86.3013698630137)
rpsR; 30S ribosomal protein S18
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=3 to=72 evalue=3.6e-23 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=6 to=72 evalue=5.7e-21)
ACD58_97_11

Not on your lists

comp(6545..7024)
DNA (480bp) protein (160aa)
hypothetical protein
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=2 to=159 evalue=6.1e-49 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=3 to=159 evalue=4.3e-47 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=4 to=144 evalue=3.7e-40 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
ACD58_97_12

Not on your lists


comp(7189..7977)
DNA (789bp) protein (263aa)
seg (db=Seg db_id=seg from=107 to=128)
seg (db=Seg db_id=seg from=245 to=261)
seg (db=Seg db_id=seg from=181 to=212)
seg (db=Seg db_id=seg from=134 to=152)
ACD58_97_13

Not on your lists

comp(8259..8696)
DNA (438bp) protein (146aa)
phospholipid-binding protein, pbp family
PEBP-like (db=superfamily db_id=SSF49777 from=1 to=144 evalue=1.3e-40 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
no description (db=Gene3D db_id=G3DSA:3.90.280.10 from=1 to=142 evalue=4.9e-38 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
PBP (db=HMMPfam db_id=PF01161 from=12 to=144 evalue=8.9e-30 interpro_id=IPR008914 interpro_description=Phosphatidylethanolamine-binding protein PEBP)
ACD58_97_14

Not on your lists

8802..9320
DNA (519bp) protein (173aa)
seg (db=Seg db_id=seg from=3 to=11)
seg (db=Seg db_id=seg from=19 to=30)
seg (db=Seg db_id=seg from=122 to=136)
seg (db=Seg db_id=seg from=56 to=67)
Displaying 14 items

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