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ACD58_158

Alias: ACD58p_107830.10669.10

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD58_158_1

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1731..2108
DNA (378bp) protein (126aa)
hypothetical protein
(db=HMMPfam db_id=PF05635 from=6 to=115 evalue=4.4e-38 interpro_id=IPR008815 interpro_description=23S rRNA-intervening sequence protein)
Uncharacterized protein {ECO:0000313|EMBL:EKD55933.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD58p_107830.10669.10_1,ACD58p_107830.10669.10G0001,ACD58_C00158G00001 id=87556 tax=ACD58 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=ACD58 organism_desc=ACD58
ACD58_158_2

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2196..2960
DNA (765bp) protein (255aa)
Transcriptional regulator, TrmB n=1 Tax=sediment metagenome RepID=D9PL89_9ZZZZ (db=UNIREF evalue=3.0e-19 bit_score=99.4 identity=31.58 coverage=90.9803921568627)
seg (db=Seg db_id=seg from=22 to=33)
seg (db=Seg db_id=seg from=60 to=69)
(db=HMMPfam db_id=PF01978 from=6 to=67 evalue=2.6e-11 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
ACD58_158_3

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comp(2972..6100)
DNA (3129bp) protein (1043aa)
methyltransferase type 11 (db=KEGG evalue=2.0e-09 bit_score=68.9 identity=28.14 coverage=16.9702780441035)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=821 to=1037 evalue=5.3e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=828 to=952 evalue=3.1e-16)
(db=HMMPfam db_id=PF08241 from=854 to=949 evalue=1.4e-10 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD58_158_4

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comp(6348..7175)
DNA (828bp) protein (276aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NJ41_9DELT (db=UNIREF evalue=1.0e-19 bit_score=100.0 identity=30.38 coverage=75.7246376811594)
(db=HMMPfam db_id=PF08843 from=36 to=240 evalue=2.4e-24 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:EKD55936.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_158_5

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comp(7165..7806)
DNA (642bp) protein (214aa)
hypothetical protein
hypothetical protein alias=ACD58p_107830.10669.10_5,ACD58p_107830.10669.10G0005,ACD58_C00158G00005 id=87553 tax=ACD58 species=Campylobacter jejuni genus=Campylobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_group=ACD58 organism_desc=ACD58
Uncharacterized protein {ECO:0000313|EMBL:EKD55937.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_158_6
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

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8134..9231
DNA (1098bp) protein (366aa)
DNA-directed DNA polymerase I
seg (db=Seg db_id=seg from=346 to=363)
DNA POLYMERASE I (db=HMMPanther db_id=PTHR10133 from=1 to=346 evalue=1.7e-115)
DNA/RNA polymerases (db=superfamily db_id=SSF56672 from=7 to=346 evalue=1.5e-101)
ACD58_158_7

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9563..9802
DNA (240bp) protein (80aa)
coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=1 to=49 evalue=5.4e-07 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01402 from=6 to=41 evalue=4.4e-06 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Uncharacterized protein {ECO:0000313|EMBL:EKD55931.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD58_158_8

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9799..10200
DNA (402bp) protein (134aa)
PilT domain-containing protein
Putative uncharacterized protein n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTZ7_9CHLB (db=UNIREF evalue=1.0e-12 bit_score=75.9 identity=40.77 coverage=95.5223880597015)
seg (db=Seg db_id=seg from=76 to=87)
seg (db=Seg db_id=seg from=22 to=32)
Displaying 8 items

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