ggKbase home page

ACD5_28

Alias: ACD5_19517.2184.9

Search features with annotation key words

Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD5_28_1

Not on your lists


2..430
DNA (429bp) protein (143aa)
rplK; 50S ribosomal protein L11
seg (db=Seg db_id=seg from=75 to=90)
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=127 to=142 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L11_bact: ribosomal protein L11 (db=HMMTigr db_id=TIGR01632 from=3 to=142 evalue=3.3e-79 interpro_id=IPR006519 interpro_description=Ribosomal protein L11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD5_28_2

Not on your lists


592..1269
DNA (678bp) protein (226aa)
rplA; 50S ribosomal protein L1
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=120 to=138 evalue=0.0 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
rplA_bact: ribosomal protein L1 (db=HMMTigr db_id=TIGR01169 from=2 to=225 evalue=3.8e-113 interpro_id=IPR005878 interpro_description=Ribosomal protein L1, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Ribosomal protein, L1p/L1a/L10e/organellar L1 types (db=HMMPIR db_id=PIRSF002155 from=1 to=225 evalue=1.5e-90 interpro_id=IPR002143 interpro_description=Ribosomal protein L1 GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
ACD5_28_3

Not on your lists

1438..2202
DNA (765bp) protein (255aa)
1438..2202 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE25717.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 3 items

View Taxonomy