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ACD60_8

Alias: ACD60_13863.207435.19

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Displaying items 1-30 of 197 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD60_8_1

Not on your lists

comp(105..653)
DNA (549bp) protein (183aa)
seg (db=Seg db_id=seg from=158 to=170)
Uncharacterized protein {ECO:0000313|EMBL:EKD55104.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_2

Not on your lists

830..1885
DNA (1056bp) protein (352aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PP53_9COXI (db=UNIREF evalue=8.0e-36 bit_score=154.0 identity=39.92 coverage=69.3181818181818)
seg (db=Seg db_id=seg from=117 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
ACD60_8_3

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comp(1887..3188)
DNA (1302bp) protein (434aa)
ABC transporter, ATP binding protein
ABC transporter, ATP binding protein
ABC transporter, ATP binding protein n=1 Tax=Rickettsiella grylli RepID=A8PQ01_9COXI (db=UNIREF evalue=2.0e-148 bit_score=529.0 identity=63.62 coverage=98.8479262672811)
seg (db=Seg db_id=seg from=104 to=123)
ACD60_8_4

Not on your lists

comp(3194..4936)
DNA (1743bp) protein (581aa)
ABC transporter permease
ABC transporter permease
ABC transporter permease protein n=6 Tax=Coxiella burnetii RepID=A9KBW3_COXBN (db=UNIREF evalue=1.0e-179 bit_score=633.0 identity=56.77 coverage=96.5576592082616)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
ACD60_8_5

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comp(4954..5733)
DNA (780bp) protein (260aa)
pteridine reductase
ADH_SHORT (db=PatternScan db_id=PS00061 from=153 to=181 evalue=0.0 interpro_id=IPR020904 interpro_description=Short-chain dehydrogenase/reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491))
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=17 to=253 evalue=2.4e-69 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF95 from=17 to=253 evalue=2.4e-69)
ACD60_8_6

Not on your lists

5737..6897
DNA (1161bp) protein (387aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=4 Tax=Coxiella burnetii RepID=A9KF00_COXBN (db=UNIREF evalue=2.0e-88 bit_score=329.0 identity=48.0 coverage=95.3488372093023)
seg (db=Seg db_id=seg from=309 to=336)
ACD60_8_7

Not on your lists

6954..7442
DNA (489bp) protein (163aa)
6-pyruvoyl tetrahydrobiopterin synthase (EC:4.2.3.12)
no description (db=Gene3D db_id=G3DSA:3.30.479.10 from=2 to=156 evalue=4.6e-24)
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=1 to=162 evalue=4.8e-24)
PTPS (db=HMMPfam db_id=PF01242 from=12 to=135 evalue=3.3e-18 interpro_id=IPR007115 interpro_description=6-pyruvoyl tetrahydropterin synthase-related GO=Molecular Function: 6-pyruvoyltetrahydropterin synthase activity (GO:0003874), Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: metal ion binding (GO:0046872))
ACD60_8_8

Not on your lists

comp(7449..8552)
DNA (1104bp) protein (368aa)
seg (db=Seg db_id=seg from=286 to=294)
coiled-coil (db=Coil db_id=coil from=125 to=146 evalue=NA)
coiled-coil (db=Coil db_id=coil from=56 to=77 evalue=NA)
coiled-coil (db=Coil db_id=coil from=17 to=38 evalue=NA)
ACD60_8_9

Not on your lists

comp(8670..9155)
DNA (486bp) protein (162aa)
Dihydrofolate reductase
Dihydrofolate reductase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GN07_THISH (db=UNIREF evalue=8.0e-47 bit_score=188.0 identity=53.12 coverage=97.5308641975309)
Dihydrofolate reductase-like (db=superfamily db_id=SSF53597 from=1 to=161 evalue=3.8e-67)
DHFR_1 (db=HMMPfam db_id=PF00186 from=2 to=160 evalue=9.0e-63 interpro_id=IPR001796 interpro_description=Dihydrofolate reductase domain GO=Molecular Function: dihydrofolate reductase activity (GO:0004146), Biological Process: glycine biosynthetic process (GO:0006545), Biological Process: nucleotide biosynthetic process (GO:0009165))
ACD60_8_10

Not on your lists

comp(9175..9351)
DNA (177bp) protein (59aa)
9175..9351 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD55113.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_11

Not on your lists

comp(9348..9470)
DNA (123bp) protein (41aa)
9348..9470 - (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD55114.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_12

Not on your lists

comp(9470..10120)
DNA (651bp) protein (217aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD55115.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MI74_9SPHN
ACD60_8_13

Not on your lists

comp(10242..11438)
DNA (1197bp) protein (399aa)
ABC transporter permease
ABC transporter permease
ABC transporter, permease n=4 Tax=Legionella pneumophila RepID=D5TBE1_LEGPN (db=UNIREF evalue=4.0e-91 bit_score=338.0 identity=48.62 coverage=99.2481203007519)
seg (db=Seg db_id=seg from=334 to=345)
ACD60_8_14

Not on your lists

comp(11435..12106)
DNA (672bp) protein (224aa)
ABC transporter ATP-binding protein n=4 Tax=Coxiella burnetii RepID=A9KEY2_COXBN (db=UNIREF evalue=5.0e-70 bit_score=267.0 identity=58.64 coverage=97.7678571428571)
ABC transporter ATP-binding protein
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=145 to=159 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=223 evalue=4.1e-106)
ACD60_8_15

Not on your lists

comp(12090..13256)
DNA (1167bp) protein (389aa)
macrolide-specific efflux protein
Macrolide-specific efflux protein n=6 Tax=Coxiella burnetii RepID=B6J9B0_COXB1 (db=UNIREF evalue=1.0e-52 bit_score=211.0 identity=34.04 coverage=96.1439588688946)
seg (db=Seg db_id=seg from=196 to=209)
RND_mfp: efflux transporter, RND family, MFP (db=HMMTigr db_id=TIGR01730 from=34 to=388 evalue=2.0e-16 interpro_id=IPR006143 interpro_description=Secretion protein HlyD GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein secretion (GO:0009306), Cellular Component: membrane (GO:0016020))
ACD60_8_16

Not on your lists

comp(13253..14701)
DNA (1449bp) protein (483aa)
type I secretion outer membrane protein
seg (db=Seg db_id=seg from=433 to=453)
seg (db=Seg db_id=seg from=401 to=413)
seg (db=Seg db_id=seg from=320 to=335)
ACD60_8_17

Not on your lists

comp(14790..15941)
DNA (1152bp) protein (384aa)
ddlA; D-alanine--D-alanine ligase (EC:6.3.2.4)
ddlA; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase A n=1 Tax=Bradyrhizobium japonicum RepID=DDLA_BRAJA (db=UNIREF evalue=2.0e-97 bit_score=359.0 identity=54.17 coverage=96.09375)
seg (db=Seg db_id=seg from=239 to=248)
ACD60_8_18

Not on your lists

comp(16020..16181)
DNA (162bp) protein (54aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=42 to=46)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD55121.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_19

Not on your lists

16445..17146
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PP21_9COXI (db=UNIREF evalue=5.0e-56 bit_score=220.0 identity=55.72 coverage=85.042735042735)
conserved exported protein of unknown function
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=5 to=15)
ACD60_8_20

Not on your lists

17166..18101
DNA (936bp) protein (312aa)
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein n=5 Tax=Coxiella burnetii RepID=A9N9A9_COXBR (db=UNIREF evalue=6.0e-63 bit_score=244.0 identity=45.42 coverage=83.3333333333333)
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=97 to=236 evalue=1.1e-29)
YkuD (db=HMMPfam db_id=PF03734 from=101 to=235 evalue=2.8e-16 interpro_id=IPR005490 interpro_description=YkuD domain)
ACD60_8_21

Not on your lists

18116..19219
DNA (1104bp) protein (368aa)
putative Naringenin-chalcone synthase (EC:2.3.1.74)
putative Naringenin-chalcone synthase (EC:2.3.1.74)
Chalcone and stilbene synthases domain protein n=2 Tax=Legionella longbeachae RepID=D1RDZ1_LEGLO (db=UNIREF evalue=8.0e-133 bit_score=477.0 identity=60.38 coverage=98.3695652173913)
Type III polyketide synthase (db=HMMPIR db_id=PIRSF000451 from=1 to=365 evalue=1.6e-95 interpro_id=IPR011141 interpro_description=Polyketide synthase, type III GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747))
ACD60_8_22

Not on your lists

19425..19925
DNA (501bp) protein (167aa)
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD55125.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_23

Not on your lists

19879..21336
DNA (1458bp) protein (486aa)
seg (db=Seg db_id=seg from=208 to=222)
Uncharacterized protein {ECO:0000313|EMBL:EKD55126.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_24

Not on your lists

comp(21392..22627)
DNA (1236bp) protein (412aa)
deoB; Phosphopentomutase (EC:5.4.2.7)
deoB; Phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=5 Tax=Legionella pneumophila RepID=DEOB_LEGPA (db=UNIREF evalue=9.0e-147 bit_score=523.0 identity=64.47 coverage=95.3883495145631)
Phosphopentomutase (db=HMMPIR db_id=PIRSF001491 from=1 to=409 evalue=1.1e-245 interpro_id=IPR010045 interpro_description=Phosphopentomutase GO=Molecular Function: magnesium ion binding (GO:0000287), Cellular Component: cytoplasm (GO:0005737), Molecular Function: phosphopentomutase activity (GO:0008973), Biological Process: nucleotide metabolic process (GO:0009117), Biological Process: cellular metabolic compound salvage (GO:0043094))
ACD60_8_25

Not on your lists

comp(22636..23925)
DNA (1290bp) protein (430aa)
major facilitator family transporter
major facilitator family transporter
Major facilitator family transporter n=6 Tax=Coxiella burnetii RepID=A9N9B3_COXBR (db=UNIREF evalue=2.0e-115 bit_score=419.0 identity=47.06 coverage=97.9069767441861)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=105)
ACD60_8_26

Not on your lists

24157..24429
DNA (273bp) protein (91aa)
24157..24429 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD55129.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_27

Not on your lists

24432..24779
DNA (348bp) protein (116aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD55130.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=5 Tax=Microcystis RepID=I4FG38_MICAE
ACD60_8_28

Not on your lists

comp(24854..25396)
DNA (543bp) protein (181aa)
24854..25396 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD55131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_29

Not on your lists

25635..25757
DNA (123bp) protein (41aa)
GIY-YIG (db=HMMPfam db_id=PF01541 from=3 to=36 evalue=1.3e-06 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=2 to=37 evalue=2.1e-06 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
Uncharacterized protein {ECO:0000313|EMBL:EKD55132.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_8_30

Not on your lists

comp(25957..26679)
DNA (723bp) protein (241aa)
Deoxyribose-phosphate aldolase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZC0_CHRSD (db=UNIREF evalue=3.0e-55 bit_score=218.0 identity=47.23 coverage=95.4356846473029)
deoxyribose-phosphate aldolase
Deoxyribose-phosphate aldolase (db=HMMPIR db_id=PIRSF001357 from=1 to=237 evalue=1.8e-73 interpro_id=IPR011343 interpro_description=Deoxyribose-phosphate aldolase GO=Molecular Function: deoxyribose-phosphate aldolase activity (GO:0004139), Cellular Component: cytoplasm (GO:0005737), Biological Process: deoxyribonucleotide catabolic process (GO:0009264))
DEOXYRIBOSE-PHOSPHATE ALDOLASE (db=HMMPanther db_id=PTHR10889 from=1 to=234 evalue=7.5e-66 interpro_id=IPR011343 interpro_description=Deoxyribose-phosphate aldolase GO=Molecular Function: deoxyribose-phosphate aldolase activity (GO:0004139), Cellular Component: cytoplasm (GO:0005737), Biological Process: deoxyribonucleotide catabolic process (GO:0009264))
Displaying items 1-30 of 197 in total

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