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ACD60_13

Alias: ACD60_1409.32789.19

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD60_13_1

Not on your lists

comp(37..918)
DNA (882bp) protein (294aa)
GTP-binding protein Era
GTP-binding protein Era
GTP-binding protein era homolog n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BX21_NITHN (db=UNIREF evalue=3.0e-82 bit_score=308.0 identity=55.17 coverage=98.2993197278912)
seg (db=Seg db_id=seg from=115 to=135)
ACD60_13_2

Not on your lists

comp(924..1583)
DNA (660bp) protein (220aa)
Ribonuclease 3 n=11 Tax=Vibrionales RepID=RNC_VIBHB (db=UNIREF evalue=1.0e-66 bit_score=255.0 identity=59.07 coverage=96.3636363636364)
rnc; ribonuclease III
RNASE_3_1 (db=PatternScan db_id=PS00517 from=34 to=42 evalue=0.0 interpro_id=IPR000999 interpro_description=Ribonuclease III GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: RNA processing (GO:0006396))
RNaseIII: ribonuclease III (db=HMMTigr db_id=TIGR02191 from=5 to=217 evalue=1.1e-91 interpro_id=IPR011907 interpro_description=Ribonuclease III, bacterial GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: ribonuclease III activity (GO:0004525), Biological Process: rRNA catabolic process (GO:0016075))
ACD60_13_3

Not on your lists

comp(1594..2373)
DNA (780bp) protein (260aa)
lepB; Signal peptidase I (EC:3.4.21.89)
Signal peptidase I (LepB-1) n=6 Tax=Legionella pneumophila RepID=Q5ZUD3_LEGPH (db=UNIREF evalue=1.0e-76 bit_score=289.0 identity=58.75 coverage=95.7692307692308)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
ACD60_13_4

Not on your lists

comp(2370..4163)
DNA (1794bp) protein (598aa)
GTP-binding protein lepA n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA53_KANKD (db=UNIREF evalue=0.0 bit_score=971.0 identity=78.41 coverage=98.9966555183946)
GTP-binding protein LepA
GTP-binding protein LepA
lepA: GTP-binding protein LepA (db=HMMTigr db_id=TIGR01393 from=2 to=595 evalue=0.0 interpro_id=IPR006297 interpro_description=GTP-binding protein LepA GO=Molecular Function: GTP binding (GO:0005525))
ACD60_13_5

Not on your lists

comp(4196..4594)
DNA (399bp) protein (133aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD54978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_6

Not on your lists

comp(4560..4829)
DNA (270bp) protein (90aa)
hypothetical protein
no description (db=Gene3D db_id=G3DSA:1.10.150.250 from=8 to=88 evalue=4.2e-22 interpro_id=IPR005631 interpro_description=Protein of unknown function DUF339)
YgfY-like (db=superfamily db_id=SSF109910 from=1 to=79 evalue=1.7e-21 interpro_id=IPR005631 interpro_description=Protein of unknown function DUF339)
Sdh5 (db=HMMPfam db_id=PF03937 from=11 to=60 evalue=1.4e-20 interpro_id=IPR005631 interpro_description=Protein of unknown function DUF339)
ACD60_13_7

Not on your lists

4962..5243
DNA (282bp) protein (94aa)
seg (db=Seg db_id=seg from=3 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKD54980.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_8

Not on your lists

5250..6434
DNA (1185bp) protein (395aa)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6N9_KANKD (db=UNIREF evalue=5.0e-173 bit_score=610.0 identity=72.54 coverage=99.4936708860759)
2-amino-3-ketobutyrate coenzyme A ligase
2-amino-3-ketobutyrate coenzyme A ligase
AA_TRANSFER_CLASS_2 (db=PatternScan db_id=PS00599 from=238 to=247 evalue=0.0 interpro_id=IPR001917 interpro_description=Aminotransferase, class-II, pyridoxal-phosphate binding site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity (GO:0016740))
ACD60_13_9

Not on your lists

6431..7456
DNA (1026bp) protein (342aa)
L-threonine 3-dehydrogenase n=2 Tax=Alteromonas macleodii RepID=TDH_ALTMD (db=UNIREF evalue=7.0e-139 bit_score=497.0 identity=66.47 coverage=99.1228070175439)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
ADH_ZINC (db=PatternScan db_id=PS00059 from=62 to=76 evalue=0.0 interpro_id=IPR002328 interpro_description=Alcohol dehydrogenase, zinc-containing, conserved site GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
ACD60_13_10

Not on your lists

7604..7855
DNA (252bp) protein (84aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
Uncharacterized protein {ECO:0000313|EMBL:EKD54983.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_11

Not on your lists

comp(7860..9242)
DNA (1383bp) protein (461aa)
Cytosol aminopeptidase family protein n=1 Tax=Rickettsiella grylli RepID=A8PNJ7_9COXI (db=UNIREF evalue=9.0e-139 bit_score=497.0 identity=51.75 coverage=98.9154013015184)
cytochrome C oxidase subunit II
cytochrome C oxidase subunit II
CYTOSOL_AP (db=PatternScan db_id=PS00631 from=303 to=310 evalue=0.0 interpro_id=IPR000819 interpro_description=Peptidase M17, leucyl aminopeptidase, C-terminal GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
ACD60_13_12

Not on your lists

comp(9252..10370)
DNA (1119bp) protein (373aa)
ald; hypothetical protein
ald; hypothetical protein
Alanine dehydrogenase n=8 Tax=Legionella RepID=D5TB71_LEGPN (db=UNIREF evalue=3.0e-130 bit_score=468.0 identity=71.58 coverage=97.8552278820375)
seg (db=Seg db_id=seg from=38 to=47)
ACD60_13_13

Not on your lists

comp(10426..10716)
DNA (291bp) protein (97aa)
10426..10716 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD54986.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_14

Not on your lists

comp(10821..12725)
DNA (1905bp) protein (635aa)
seg (db=Seg db_id=seg from=228 to=235)
Uncharacterized protein {ECO:0000313|EMBL:EKD54987.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_15

Not on your lists

comp(12816..14732)
DNA (1917bp) protein (639aa)
Chaperone protein htpG n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C4K9_NITHN (db=UNIREF evalue=0.0 bit_score=827.0 identity=62.36 coverage=98.1220657276995)
heat shock protein 90
heat shock protein 90
seg (db=Seg db_id=seg from=500 to=514)
ACD60_13_16

Not on your lists

comp(14794..15984)
DNA (1191bp) protein (397aa)
multidrug resistance transporter, Bcr family
multidrug resistance transporter, Bcr family
Multidrug resistance transporter, Bcr family n=4 Tax=Coxiella burnetii RepID=A9KCG5_COXBN (db=UNIREF evalue=1.0e-121 bit_score=440.0 identity=54.95 coverage=96.4735516372796)
transmembrane_regions (db=TMHMM db_id=tmhmm from=332 to=354)
ACD60_13_17

Not on your lists

comp(16006..16455)
DNA (450bp) protein (150aa)
hypothetical protein (db=KEGG evalue=3.0e-11 bit_score=70.5 identity=38.54 coverage=61.3333333333333)
Putative uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D3HR47_LEGLN (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=38.54 coverage=61.3333333333333)
seg (db=Seg db_id=seg from=9 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD60_13_18

Not on your lists

16559..17155
DNA (597bp) protein (199aa)
hypothetical protein
CBS domain-containing protein n=5 Tax=Coxiella burnetii RepID=A9KDI4_COXBN (db=UNIREF evalue=2.0e-27 bit_score=125.0 identity=36.41 coverage=96.4824120603015)
CBS (db=HMMPfam db_id=PF00571 from=69 to=89 evalue=0.0022 interpro_id=IPR000644 interpro_description=Cystathionine beta-synthase, core)
CBS protein {ECO:0000313|EMBL:EKD54991.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_13_19

Not on your lists

17185..20754
DNA (3570bp) protein (1190aa)
Pyridine nucleotide-disulfide oxidoreductase family n=6 Tax=Coxiella burnetii RepID=A9KCM6_COXBN (db=UNIREF evalue=0.0 bit_score=1330.0 identity=56.01 coverage=97.2268907563025)
pyridine nucleotide-disulfide oxidoreductase family
pyridine nucleotide-disulfide oxidoreductase family
seg (db=Seg db_id=seg from=121 to=132)
ACD60_13_20

Not on your lists

comp(20720..22525)
DNA (1806bp) protein (602aa)
seg (db=Seg db_id=seg from=4 to=17)
seg (db=Seg db_id=seg from=230 to=244)
RNI-like (db=superfamily db_id=SSF52047 from=78 to=263 evalue=7.6e-21)
no description (db=Gene3D db_id=G3DSA:3.80.10.10 from=27 to=292 evalue=9.3e-18)
ACD60_13_21

Not on your lists

comp(22547..23209)
DNA (663bp) protein (221aa)
O-methyltransferase
Methyltransf_3 (db=HMMPfam db_id=PF01596 from=18 to=220 evalue=3.3e-84 interpro_id=IPR002935 interpro_description=O-methyltransferase, family 3 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
O-METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10509 from=7 to=220 evalue=4.6e-73 interpro_id=IPR002935 interpro_description=O-methyltransferase, family 3 GO=Molecular Function: O-methyltransferase activity (GO:0008171))
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=4 to=208 evalue=1.6e-57)
ACD60_13_22

Not on your lists

23279..23857
DNA (579bp) protein (193aa)
LemA
LemA n=6 Tax=Coxiella burnetii RepID=A9KCR6_COXBN (db=UNIREF evalue=2.0e-67 bit_score=258.0 identity=73.68 coverage=88.0829015544041)
seg (db=Seg db_id=seg from=3 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD60_13_23

Not on your lists

23858..24907
DNA (1050bp) protein (350aa)
htpX; heat shock protein HtpX (EC:3.4.24.-)
htpX; heat shock protein HtpX (EC:3.4.24.-)
Endopeptidase n=6 Tax=Coxiella burnetii RepID=B6J875_COXB1 (db=UNIREF evalue=2.0e-107 bit_score=392.0 identity=60.18 coverage=95.1428571428571)
seg (db=Seg db_id=seg from=229 to=252)
ACD60_13_24

Not on your lists

24891..25850
DNA (960bp) protein (320aa)
hemH; ferrochelatase
hemH; ferrochelatase
Ferrochelatase n=1 Tax=Edwardsiella tarda ATCC 23685 RepID=D4F337_EDWTA (db=UNIREF evalue=1.0e-92 bit_score=343.0 identity=52.09 coverage=96.25)
seg (db=Seg db_id=seg from=169 to=179)
ACD60_13_25

Not on your lists

25888..26439
DNA (552bp) protein (184aa)
hypothetical protein
PagL (db=HMMPfam db_id=PF09411 from=44 to=171 evalue=1.5e-21 interpro_id=IPR018550 interpro_description=Lipid A 3-O-deacylase-related)
Uncharacterized protein {ECO:0000313|EMBL:EKD54998.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
lipidA 3-O-deacylase n=1 Tax=Diplorickettsia massiliensis 20B RepID=UPI00029B423D
ACD60_13_26

Not on your lists

26489..28375
DNA (1887bp) protein (629aa)
pbpA; penicillin-binding protein
pbpA; penicillin-binding protein
Cell elongation specific D,D-transpeptidase n=6 Tax=Coxiella burnetii RepID=B6J871_COXB1 (db=UNIREF evalue=3.0e-172 bit_score=609.0 identity=49.34 coverage=95.8664546899841)
seg (db=Seg db_id=seg from=24 to=36)
ACD60_13_27

Not on your lists

28362..29504
DNA (1143bp) protein (381aa)
cell shape-determining protein RodA
cell shape-determining protein RodA
Rod shape-determining protein RodA n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15VK7_PSEA6 (db=UNIREF evalue=6.0e-100 bit_score=367.0 identity=57.5 coverage=93.9632545931758)
transmembrane_regions (db=TMHMM db_id=tmhmm from=173 to=190)
ACD60_13_28

Not on your lists

29569..30534
DNA (966bp) protein (322aa)
mltB; Membrane-bound lytic murein transglycosylase B
Lytic murein transglycosylase B n=1 Tax=Gallionella capsiferriformans ES-2 RepID=C5V2S9_9PROT (db=UNIREF evalue=8.0e-64 bit_score=247.0 identity=44.48 coverage=90.3726708074534)
seg (db=Seg db_id=seg from=5 to=15)
seg (db=Seg db_id=seg from=153 to=167)
ACD60_13_29

Not on your lists

30527..31405
DNA (879bp) protein (293aa)
rare lipoprotein A
seg (db=Seg db_id=seg from=10 to=24)
rlpA: rare lipoprotein A (db=HMMTigr db_id=TIGR00413 from=82 to=172 evalue=4.5e-52 interpro_id=IPR012997 interpro_description=Rare lipoprotein A, bacterial)
DPBB_1 (db=HMMPfam db_id=PF03330 from=80 to=168 evalue=3.8e-19 interpro_id=IPR005132 interpro_description=Rare lipoprotein A)
ACD60_13_30

Not on your lists

31409..32767
DNA (1359bp) protein (453aa)
membrane endopeptidase, M50 family
membrane endopeptidase, M50 family
Protease ecfE n=2 Tax=Coxiella burnetii RepID=A9N8P9_COXBR (db=UNIREF evalue=2.0e-89 bit_score=333.0 identity=41.27 coverage=92.9359823399558)
transmembrane_regions (db=TMHMM db_id=tmhmm from=380 to=402)
Displaying 30 items

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