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ACD60_14

Alias: ACD60_1384.27113.20

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD60_14_1

Not on your lists

comp(52..1131)
DNA (1080bp) protein (360aa)
alanine racemase (EC:5.1.1.1)
alanine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C1J7_NITHN (db=UNIREF evalue=3.0e-96 bit_score=355.0 identity=53.93 coverage=97.2222222222222)
seg (db=Seg db_id=seg from=267 to=278)
ACD60_14_2

Not on your lists

comp(1138..2517)
DNA (1380bp) protein (460aa)
Replicative DNA helicase n=1 Tax=Rickettsiella grylli RepID=A8PLH3_9COXI (db=UNIREF evalue=4.0e-179 bit_score=631.0 identity=69.46 coverage=95.6521739130435)
replicative DNA helicase
replicative DNA helicase
seg (db=Seg db_id=seg from=314 to=322)
ACD60_14_3

Not on your lists

comp(2577..3752)
DNA (1176bp) protein (392aa)
multidrug resistance protein D
multidrug resistance protein D
Multidrug resistance protein D n=5 Tax=Legionella pneumophila RepID=Q5ZTC8_LEGPH (db=UNIREF evalue=3.0e-88 bit_score=329.0 identity=48.08 coverage=92.6020408163265)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=230)
ACD60_14_4

Not on your lists

comp(3815..4771)
DNA (957bp) protein (319aa)
coiled-coil (db=Coil db_id=coil from=157 to=178 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD55204.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_5

Not on your lists


comp(4939..5391)
DNA (453bp) protein (151aa)
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8P9_VIBHO (db=UNIREF evalue=9.0e-39 bit_score=162.0 identity=63.76 coverage=98.0132450331126)
seg (db=Seg db_id=seg from=48 to=69)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
ACD60_14_6

Not on your lists

comp(5407..6333)
DNA (927bp) protein (309aa)
hypothetical membrane spanning protein
Hypothetical membrane spanning protein n=6 Tax=Coxiella burnetii RepID=B6J6T9_COXB1 (db=UNIREF evalue=1.0e-21 bit_score=107.0 identity=30.19 coverage=81.2297734627832)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=264)
ACD60_14_7

Not on your lists


comp(6367..6591)
DNA (225bp) protein (75aa)
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=RS18_BUCCC (db=UNIREF evalue=9.0e-23 bit_score=108.0 identity=64.86 coverage=97.3333333333333)
RIBOSOMAL_S18 (db=PatternScan db_id=PS00057 from=21 to=44 evalue=0.0 interpro_id=IPR018275 interpro_description=Ribosomal protein S18, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=4 to=73 evalue=1.0e-29 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD60_14_8

Not on your lists


comp(6607..7065)
DNA (459bp) protein (153aa)
30S ribosomal protein S6 n=1 Tax=Azoarcus sp. BH72 RepID=RS6_AZOSB (db=UNIREF evalue=5.0e-43 bit_score=176.0 identity=65.52 coverage=75.1633986928105)
30S ribosomal protein S6
RIBOSOMAL_S6 (db=PatternScan db_id=PS01048 from=43 to=52 evalue=0.0 interpro_id=IPR020815 interpro_description=Ribosomal protein S6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=104 evalue=6.2e-34 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD60_14_9

Not on your lists

comp(7387..7920)
DNA (534bp) protein (178aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVR5_DESOH (db=UNIREF evalue=1.0e-12 bit_score=75.5 identity=29.88 coverage=80.8988764044944)
seg (db=Seg db_id=seg from=2 to=13)
Uncharacterized protein {ECO:0000313|EMBL:EKD55209.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_10

Not on your lists

comp(7895..8008)
DNA (114bp) protein (38aa)
7895..8008 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD55210.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_11

Not on your lists

comp(8005..8313)
DNA (309bp) protein (103aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD55211.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ORF H1617 protein n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B1Q3_PELLD
ACD60_14_12

Not on your lists

comp(8363..8893)
DNA (531bp) protein (177aa)
ORF H1617 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVR6_DESOH (db=UNIREF evalue=8.0e-25 bit_score=116.0 identity=40.0 coverage=81.3559322033898)
hypothetical protein
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=8 to=115 evalue=2.4e-08)
Uncharacterized protein {ECO:0000313|EMBL:EKD55212.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_13

Not on your lists

9357..10508
DNA (1152bp) protein (384aa)
Filamentation induced by cAMP protein Fic n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTC7_9BACT (db=UNIREF evalue=4.0e-124 bit_score=448.0 identity=59.11 coverage=98.9583333333333)
Fic family protein
seg (db=Seg db_id=seg from=279 to=288)
Fic-like (db=superfamily db_id=SSF140931 from=101 to=297 evalue=4.7e-49)
ACD60_14_14

Not on your lists

comp(10642..10845)
DNA (204bp) protein (68aa)
seg (db=Seg db_id=seg from=34 to=48)
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
Uncharacterized protein {ECO:0000313|EMBL:EKD55214.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_15

Not on your lists

10963..11286
DNA (324bp) protein (108aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=103)
Uncharacterized protein {ECO:0000313|EMBL:EKD55215.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_16

Not on your lists

comp(11297..12859)
DNA (1563bp) protein (521aa)
putative 2,4-dichlorophenol 6-monooxygenase (EC:1.14.13.20)
FAD-binding monooxygenase n=1 Tax=Rhodococcus jostii RHA1 RepID=Q0S9S6_RHOSR (db=UNIREF evalue=8.0e-50 bit_score=202.0 identity=30.86 coverage=93.8579654510557)
seg (db=Seg db_id=seg from=7 to=20)
seg (db=Seg db_id=seg from=59 to=70)
Chlorocyclohexane and chlorobenzene degradation Jill Banfield (11/15/12)
ACD60_14_17

Not on your lists

comp(12885..14795)
DNA (1911bp) protein (637aa)
seg (db=Seg db_id=seg from=145 to=152)
seg (db=Seg db_id=seg from=74 to=82)
Uncharacterized protein {ECO:0000313|EMBL:EKD55217.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_18

Not on your lists

comp(14797..15207)
DNA (411bp) protein (137aa)
Cytochrome c5
no description (db=Gene3D db_id=G3DSA:1.10.760.10 from=46 to=129 evalue=6.3e-19 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
Cytochrome c (db=superfamily db_id=SSF46626 from=47 to=130 evalue=9.3e-19 interpro_id=IPR009056 interpro_description=Cytochrome c domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
CYTCHROMECIE (db=FPrintScan db_id=PR00607 from=116 to=127 evalue=6.9e-07 interpro_id=IPR002323 interpro_description=Cytochrome c, class IE GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: heme binding (GO:0020037))
1 CxxCh and 1 CxxCS domain Jill Banfield (11/15/12)
ACD60_14_19

Not on your lists

comp(15224..16228)
DNA (1005bp) protein (335aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=224 to=242 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
Thioredoxin-like (db=superfamily db_id=SSF52833 from=49 to=215 evalue=6.7e-36 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD60_14_20

Not on your lists

comp(16225..17103)
DNA (879bp) protein (293aa)
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase n=6 Tax=Coxiella burnetii RepID=CYOE_COXB1 (db=UNIREF evalue=5.0e-78 bit_score=294.0 identity=66.08 coverage=96.9283276450512)
seg (db=Seg db_id=seg from=43 to=61)
seg (db=Seg db_id=seg from=92 to=104)
ACD60_14_21

Not on your lists

comp(17100..18125)
DNA (1026bp) protein (342aa)
Cytochrome oxidase assembly family protein (fragment)
seg (db=Seg db_id=seg from=160 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=311 to=333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=279 to=301)
ACD60_14_22

Not on your lists

comp(18118..18603)
DNA (486bp) protein (162aa)
hypothetical protein
seg (db=Seg db_id=seg from=7 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD55222.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_14_23

Not on your lists

comp(18596..19342)
DNA (747bp) protein (249aa)
hypothetical protein
seg (db=Seg db_id=seg from=20 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=222 to=241)
ACD60_14_24

Not on your lists

comp(19339..19920)
DNA (582bp) protein (194aa)
Cytochrome c oxidase, assembly transmembrane protein CoxG n=1 Tax=Rickettsiella grylli RepID=A8PL76_9COXI (db=UNIREF evalue=3.0e-42 bit_score=174.0 identity=52.94 coverage=77.319587628866)
Cytochrome c oxidase assembly protein ctaG
seg (db=Seg db_id=seg from=12 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD60_14_25

Not on your lists

comp(19922..21520)
DNA (1599bp) protein (533aa)
ctaD; Cytochrome c oxidase subunit 1 (EC:1.9.3.1)
ctaD; Cytochrome c oxidase subunit 1 (EC:1.9.3.1)
Cytochrome-c oxidase, subunit I n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQV4_HAHCH (db=UNIREF evalue=0.0 bit_score=798.0 identity=70.57 coverage=98.3114446529081)
transmembrane_regions (db=TMHMM db_id=tmhmm from=165 to=187)
ACD60_14_26

Not on your lists

comp(21545..22690)
DNA (1146bp) protein (382aa)
coxB; cytochrome c oxidase, subunit II
seg (db=Seg db_id=seg from=48 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=86 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ACD60_14_27

Not on your lists

22851..24419
DNA (1569bp) protein (523aa)
cycA; cytochrome c
cycA; cytochrome c
Cytochrome c n=1 Tax=Rickettsiella grylli RepID=A8PL80_9COXI (db=UNIREF evalue=2.0e-116 bit_score=423.0 identity=50.33 coverage=85.65965583174)
Four CxxCH motifs, 2 CxxCS Jill Banfield (11/15/12)
ACD60_14_28

Not on your lists

24444..25322
DNA (879bp) protein (293aa)
COX; Cytochrome c oxidase subunit 3 (EC:1.9.3.1)
seg (db=Seg db_id=seg from=95 to=105)
seg (db=Seg db_id=seg from=277 to=288)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD60_14_29

Not on your lists

25324..25704
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=11 to=21)
seg (db=Seg db_id=seg from=35 to=46)
seg (db=Seg db_id=seg from=102 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
ACD60_14_30

Not on your lists

25720..26157
DNA (438bp) protein (146aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=140)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=101)
Displaying items 1-30 of 31 in total

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