Alias: ACD60_4057.23241.19
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD60_38_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(87..707)
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phosphoheptose isomerase
no description (db=Gene3D db_id=G3DSA:3.40.50.10490 from=36 to=193 evalue=5.3e-29)
SIS domain (db=superfamily db_id=SSF53697 from=14 to=196 evalue=3.0e-24)
SIS (db=HMMPfam db_id=PF01380 from=103 to=166 evalue=0.0002 interpro_id=IPR001347 interpro_description=Sugar isomerase (SIS) GO=Molecular Function: sugar binding (GO:0005529), Biological Process: carbohydrate metabolic process (GO:0005975))
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ACD60_38_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(760..1977)
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FAD dependent oxidoreductase
FAD dependent oxidoreductase
FAD dependent oxidoreductase n=1 Tax=Meiothermus ruber DSM 1279 RepID=D3PTM5_MEIRD (db=UNIREF evalue=3.0e-112 bit_score=408.0 identity=51.76 coverage=97.2906403940887)
seg (db=Seg db_id=seg from=12 to=21)
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ACD60_38_3
uncultured bacterium, Bacteria
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Not on your lists |
2148..2666
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Transcriptional activator n=6 Tax=Coxiella burnetii RepID=A9KFI0_COXBN (db=UNIREF evalue=2.0e-37 bit_score=158.0 identity=49.34 coverage=86.1271676300578)
rfaH; transcriptional activator RfaH
RfaH: transcriptional activator RfaH (db=HMMTigr db_id=TIGR01955 from=9 to=170 evalue=1.6e-49 interpro_id=IPR010215 interpro_description=Transcription activator RfaH GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=6 to=106 evalue=9.0e-22 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
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ACD60_38_4
uncultured bacterium, Bacteria
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Not on your lists |
2705..4714
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polysaccharide biosynthesis protein CapD
polysaccharide biosynthesis protein CapD
Nucleoside-diphosphate sugar epimerase n=5 Tax=Legionella pneumophila RepID=D5TBQ0_LEGPN (db=UNIREF evalue=2.0e-140 bit_score=503.0 identity=47.39 coverage=88.955223880597)
seg (db=Seg db_id=seg from=250 to=264)
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ACD60_38_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(4706..5527)
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apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Marinomonas sp. MWYL1 RepID=APAH_MARMS (db=UNIREF evalue=6.0e-81 bit_score=303.0 identity=57.25 coverage=97.8102189781022)
seg (db=Seg db_id=seg from=68 to=78)
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ACD60_38_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(5524..6309)
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Ribosomal RNA small subunit methyltransferase A n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=RSMA_CHRSD (db=UNIREF evalue=7.0e-78 bit_score=293.0 identity=56.47 coverage=95.4198473282443)
dimethyladenosine transferase (rRNA methylation) (EC:2.1.1.-)
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=36 to=63 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
ksgA: dimethyladenosine transferase (db=HMMTigr db_id=TIGR00755 from=4 to=258 evalue=6.8e-101 interpro_id=IPR011530 interpro_description=Ribosomal RNA adenine dimethylase GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: rRNA (adenine) methyltransferase activity (GO:0016433))
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ACD60_38_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(6327..7019)
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hcpC; Putative beta-lactamase hcpC precursor (EC:3.5.2.6)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=37 to=229 evalue=2.7e-57 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
HCP-like (db=superfamily db_id=SSF81901 from=38 to=229 evalue=1.0e-46)
SEL-1-LIKE PROTEIN (db=HMMPanther db_id=PTHR11102 from=32 to=228 evalue=7.8e-46)
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ACD60_38_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(7057..7851)
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ACD60_38_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(7993..8478)
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hypothetical protein
Toxin_YhaV (db=HMMPfam db_id=PF11663 from=14 to=152 evalue=2.6e-65 interpro_id=IPR021679 interpro_description=Toxin endonuclease, YhaV)
Uncharacterized protein {ECO:0000313|EMBL:EKD54139.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MX80_9CYAN
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ACD60_38_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(8481..8801)
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HtaR suppressor protein
P72669_SYNY3_P72669; (db=BlastProDom db_id=PD030562 from=9 to=95 evalue=1.0e-24)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=2 to=52 evalue=3.9e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKD54140.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD60_38_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(8984..9643)
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ABC-type transporter, integral membrane subunit
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
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ACD60_38_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(9612..10667)
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Methionine import ATP-binding protein MetN n=6 Tax=Coxiella burnetii RepID=METN_COXBU (db=UNIREF evalue=1.0e-97 bit_score=360.0 identity=53.18 coverage=98.0113636363636)
metN; D-methionine ABC transporter ATP-binding protein
metN; D-methionine ABC transporter ATP-binding protein
seg (db=Seg db_id=seg from=71 to=83)
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ACD60_38_13
uncultured bacterium, Bacteria
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Not on your lists |
10740..12161
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pncB; nicotinate phosphoribosyltransferase
pncB; nicotinate phosphoribosyltransferase
Nicotinate phosphoribosyltransferase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZDK0_9BACT (db=UNIREF evalue=2.0e-148 bit_score=529.0 identity=55.44 coverage=97.8902953586498)
seg (db=Seg db_id=seg from=120 to=131)
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ACD60_38_14
uncultured bacterium, Bacteria
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Not on your lists |
12154..12864
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tRNA (guanine-N(7)-)-methyltransferase
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BPW5_9GAMM (db=UNIREF evalue=1.0e-61 bit_score=239.0 identity=51.2 coverage=87.3417721518987)
seg (db=Seg db_id=seg from=6 to=20)
TIGR00091: tRNA (guanine-N(7)-)-methyltrans (db=HMMTigr db_id=TIGR00091 from=39 to=231 evalue=1.9e-66 interpro_id=IPR003358 interpro_description=tRNA (guanine-N-7) methyltransferase GO=Biological Process: tRNA modification (GO:0006400), Molecular Function: tRNA (guanine-N7-)-methyltransferase activity (GO:0008176))
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ACD60_38_15
uncultured bacterium, Bacteria
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Not on your lists |
12962..13567
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Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PML7_9COXI (db=UNIREF evalue=2.0e-13 bit_score=79.0 identity=31.47 coverage=92.5742574257426)
OmpA-like transmembrane domain protein (db=KEGG evalue=1.0e-08 bit_score=62.8 identity=29.17 coverage=87.6237623762376)
OMPA-like (db=superfamily db_id=SSF56925 from=13 to=191 evalue=1.6e-21)
no description (db=Gene3D db_id=G3DSA:2.40.160.20 from=14 to=191 evalue=1.7e-16 interpro_id=IPR011250 interpro_description=Outer membrane protein, beta-barrel GO=Cellular Component: cell outer membrane (GO:0009279), Cellular Component: integral to membrane (GO:0016021))
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ACD60_38_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(13569..14747)
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Coproporphyrinogen III oxidase, anaerobic n=1 Tax=Pseudomonas mendocina ymp RepID=A4XZZ0_PSEMY (db=UNIREF evalue=3.0e-119 bit_score=432.0 identity=56.8 coverage=94.910941475827)
HemN family oxidoreductase
HemN family oxidoreductase
hemN_rel: putative oxygen-independent coprop (db=HMMTigr db_id=TIGR00539 from=8 to=372 evalue=2.2e-126 interpro_id=IPR004559 interpro_description=Putative oxygen-independent coproporphyrinogen III oxidase GO=Molecular Function: coproporphyrinogen oxidase activity (GO:0004109), Cellular Component: cytoplasm (GO:0005737), Biological Process: porphyrin biosynthetic process (GO:0006779), Biological Process: oxidation reduction (GO:0055114))
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ACD60_38_17
uncultured bacterium, Bacteria
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Not on your lists |
14860..15852
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mdh; malate dehydrogenase
Malate dehydrogenase n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3L2_9GAMM (db=UNIREF evalue=9.0e-135 bit_score=483.0 identity=73.31 coverage=98.1873111782477)
seg (db=Seg db_id=seg from=236 to=246)
coiled-coil (db=Coil db_id=coil from=305 to=326 evalue=NA)
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ACD60_38_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(15856..16914)
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15856..16914 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD54148.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD60_38_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(17004..17339)
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Putative uncharacterized protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VI22_9CYAN (db=UNIREF evalue=5.0e-16 bit_score=86.7 identity=54.44 coverage=79.4642857142857)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
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ACD60_38_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(17403..18167)
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ZIP family zinc transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=234 to=253)
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
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ACD60_38_21
uncultured bacterium, Bacteria
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Not on your lists |
18275..18916
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peptidase M50
Peptidase M50 n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C211_NITHN (db=UNIREF evalue=4.0e-59 bit_score=231.0 identity=58.6 coverage=98.5981308411215)
seg (db=Seg db_id=seg from=181 to=193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
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ACD60_38_22
uncultured bacterium, Bacteria
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Not on your lists |
18952..21213
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PAS sensor histidine kinase domain protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=474 to=496)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
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ACD60_38_23
uncultured bacterium, Bacteria
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Not on your lists |
21218..21622
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Response regulator receiver CheY-like domain-containing protein n=2 Tax=Legionella longbeachae RepID=D1RF30_LEGLO (db=UNIREF evalue=6.0e-41 bit_score=169.0 identity=67.2 coverage=91.8518518518518)
putative two-component response regulator
CheY-like (db=superfamily db_id=SSF52172 from=4 to=129 evalue=6.3e-32 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=7 to=121 evalue=1.1e-30 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD60_38_24
uncultured bacterium, Bacteria
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Not on your lists |
21619..23238
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Putative regulatory protein (GGDEF domain) n=1 Tax=Legionella longbeachae NSW150 RepID=D3HM45_LEGLN (db=UNIREF evalue=1.0e-136 bit_score=490.0 identity=46.15 coverage=98.1481481481482)
regulatory protein (GGDEF domain)
regulatory protein (GGDEF domain)
no description (db=HMMSmart db_id=SM00267 from=362 to=535 evalue=1.1e-58 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
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