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ACD60_43

Alias: ACD60_6559.16863.18

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD60_43_1

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comp(48..1487)
DNA (1440bp) protein (480aa)
lpdA; dihydrolipoyl dehydrogenase, E3 component of pyruvate dehydrogenases complex (EC:1.8.1.4)
lpdA; dihydrolipoyl dehydrogenase, E3 component of pyruvate dehydrogenases complex (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=6 Tax=Coxiella burnetii RepID=B6J8H1_COXB1 (db=UNIREF evalue=0.0 bit_score=650.0 identity=69.83 coverage=98.125)
seg (db=Seg db_id=seg from=233 to=246)
ACD60_43_2

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comp(1497..2768)
DNA (1272bp) protein (424aa)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.12)
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA14_KANKD (db=UNIREF evalue=2.0e-126 bit_score=456.0 identity=57.45 coverage=98.3490566037736)
seg (db=Seg db_id=seg from=52 to=67)
ACD60_43_3

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comp(2782..5445)
DNA (2664bp) protein (888aa)
aceE; Pyruvate dehydrogenase E1 component (EC:1.2.4.1)
aceE; Pyruvate dehydrogenase E1 component (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component oxidoreductase protein AceE n=5 Tax=Legionella pneumophila RepID=Q5ZVD6_LEGPH (db=UNIREF evalue=0.0 bit_score=1108.0 identity=61.07 coverage=98.8738738738739)
seg (db=Seg db_id=seg from=847 to=858)
ACD60_43_4

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5622..6518
DNA (897bp) protein (299aa)
seg (db=Seg db_id=seg from=15 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKD53915.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_43_5

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comp(6528..7385)
DNA (858bp) protein (286aa)
cobalamin-binding protein
"Helical backbone" metal receptor (db=superfamily db_id=SSF53807 from=35 to=277 evalue=6.0e-56)
no description (db=Gene3D db_id=G3DSA:3.40.50.1980 from=153 to=281 evalue=2.2e-34)
Peripla_BP_2 (db=HMMPfam db_id=PF01497 from=39 to=256 evalue=4.6e-25 interpro_id=IPR002491 interpro_description=Periplasmic binding protein GO=Molecular Function: iron ion transmembrane transporter activity (GO:0005381), Biological Process: high-affinity iron ion transport (GO:0006827))
ACD60_43_6

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comp(7382..8212)
DNA (831bp) protein (277aa)
signaling modulator of AmpD, AmpE
seg (db=Seg db_id=seg from=46 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=256 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
ACD60_43_7

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comp(8240..8791)
DNA (552bp) protein (184aa)
N-acetyl-anhydromuramyl-L-alanine amidase n=1 Tax=Marinobacter algicola DG893 RepID=A6F579_9ALTE (db=UNIREF evalue=5.0e-59 bit_score=229.0 identity=63.91 coverage=90.7608695652174)
N-acetyl-anhydromuranmyl-L-alanine amidase
no description (db=Gene3D db_id=G3DSA:3.40.80.10 from=3 to=173 evalue=1.5e-64 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
N-acetylmuramoyl-L-alanine amidase-like (db=superfamily db_id=SSF55846 from=1 to=177 evalue=8.7e-57 interpro_id=IPR002502 interpro_description=N-acetylmuramoyl-L-alanine amidase, family 2 GO=Molecular Function: N-acetylmuramoyl-L-alanine amidase activity (GO:0008745), Biological Process: peptidoglycan catabolic process (GO:0009253))
ACD60_43_8

Not on your lists

8954..9718
DNA (765bp) protein (255aa)
8954..9718 + (rbs_motif=GGAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53919.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_43_9

Not on your lists

9762..10331
DNA (570bp) protein (190aa)
seg (db=Seg db_id=seg from=144 to=155)
Uncharacterized protein {ECO:0000313|EMBL:EKD53920.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD60_43_10

Not on your lists

10443..10688
DNA (246bp) protein (82aa)
BolA superfamily transcriptional regulator
Stress-induced morphoprotein, BolA type (db=HMMPIR db_id=PIRSF003113 from=1 to=80 evalue=1.3e-26 interpro_id=IPR002634 interpro_description=BolA-like protein)
BolA-like (db=superfamily db_id=SSF82657 from=1 to=81 evalue=7.4e-24 interpro_id=IPR002634 interpro_description=BolA-like protein)
no description (db=Gene3D db_id=G3DSA:3.30.300.90 from=1 to=78 evalue=9.5e-24 interpro_id=IPR002634 interpro_description=BolA-like protein)
ACD60_43_11

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11422..11994
DNA (573bp) protein (191aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SDS6_THISK (db=UNIREF evalue=2.0e-72 bit_score=274.0 identity=72.19 coverage=97.3821989528796)
seg (db=Seg db_id=seg from=144 to=157)
AROM/DEHYDROQUINATE SYNTHASE (db=HMMPanther db_id=PTHR21090 from=1 to=188 evalue=9.3e-69)
ACD60_43_12

Not on your lists

comp(11997..13208)
DNA (1212bp) protein (404aa)
hypothetical protein (db=KEGG evalue=6.0e-12 bit_score=75.9 identity=37.4 coverage=26.7326732673267)
seg (db=Seg db_id=seg from=37 to=59)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=91 to=368 evalue=6.3e-28 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
Pkinase (db=HMMPfam db_id=PF00069 from=110 to=325 evalue=4.2e-21 interpro_id=IPR017442 interpro_description=Serine/threonine-protein kinase-like domain GO=Molecular Function: protein kinase activity (GO:0004672), Molecular Function: ATP binding (GO:0005524), Biological Process: protein amino acid phosphorylation (GO:0006468))
ACD60_43_13

Not on your lists

comp(13302..14465)
DNA (1164bp) protein (388aa)
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Geobacter sp. FRC-32 RepID=B9M5F5_GEOSF (db=UNIREF evalue=1.0e-116 bit_score=423.0 identity=53.4 coverage=98.1958762886598)
seg (db=Seg db_id=seg from=325 to=336)
ACD60_43_14

Not on your lists

14573..15178
DNA (606bp) protein (202aa)
Antioxidant, AhpC/TSA family n=1 Tax=Shewanella violacea DSS12 RepID=D4ZJA4_SHEVD (db=UNIREF evalue=2.0e-84 bit_score=314.0 identity=70.65 coverage=99.009900990099)
AhpC/TSA family antioxidant
AhpC/TSA family antioxidant
PEROXIREDOXINS, PRX-1, PRX-2, PRX-3 (db=HMMPanther db_id=PTHR10681:SF8 from=2 to=199 evalue=4.0e-86)
ACD60_43_15

Not on your lists

15497..16873
DNA (1377bp) protein (459aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=D3RMS2_ALLVD (db=UNIREF evalue=9.0e-22 bit_score=108.0 identity=29.1 coverage=75.3812636165577)
seg (db=Seg db_id=seg from=304 to=316)
seg (db=Seg db_id=seg from=322 to=331)
Displaying 15 items

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