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ACD60_76

Alias: ACD60_235366.2438.4

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Displaying 3 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD60_76_1

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comp(25..378)
DNA (354bp) protein (118aa)
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 n=4 Tax=unclassified Gammaproteobacteria RepID=A0Z7S4_9GAMM (db=UNIREF evalue=3.0e-42 bit_score=173.0 identity=73.04 coverage=96.6101694915254)
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
rplT_bact: ribosomal protein L20 (db=HMMTigr db_id=TIGR01032 from=1 to=114 evalue=2.4e-73 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD60_76_2

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comp(422..616)
DNA (195bp) protein (65aa)
LSU ribosomal protein L35P
50S ribosomal protein L35 n=19 Tax=Xanthomonadaceae RepID=RL35_STRM5 (db=UNIREF evalue=9.0e-12 bit_score=72.4 identity=69.23 coverage=96.9230769230769)
seg (db=Seg db_id=seg from=33 to=41)
RIBOSOMAL_L35 (db=PatternScan db_id=PS00936 from=5 to=30 evalue=0.0 interpro_id=IPR018265 interpro_description=Ribosomal protein L35, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD60_76_3

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comp(630..1091)
DNA (462bp) protein (154aa)
translation initiation factor IF-3
Translation initiation factor IF-3 n=8 Tax=Legionella RepID=IF3_LEGPA (db=UNIREF evalue=6.0e-45 bit_score=182.0 identity=64.47 coverage=98.0519480519481)
seg (db=Seg db_id=seg from=54 to=72)
IF3 (db=PatternScan db_id=PS00938 from=41 to=54 evalue=0.0 interpro_id=IPR019813 interpro_description=Translation initiation factor 3, conserved site GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Displaying 3 items

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