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ACD61_11

Alias: ACD61_101490.7858.9

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_11_1

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comp(3..731)
DNA (729bp) protein (243aa)
MalE-like maltose/maltodextrin ABC transporter
seg (db=Seg db_id=seg from=95 to=107)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=29 to=233 evalue=2.1e-33)
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=26 to=172 evalue=1.9e-22)
ACD61_11_2

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1046..2773
DNA (1728bp) protein (576aa)
VanW family protein
VanW family protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEB1_THET1 (db=UNIREF evalue=5.0e-62 bit_score=243.0 identity=39.04 coverage=63.0208333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
VanW (db=HMMPfam db_id=PF04294 from=352 to=484 evalue=4.8e-43 interpro_id=IPR007391 interpro_description=VanW)
ACD61_11_3

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3370..3993
DNA (624bp) protein (208aa)
O-sialoglycoprotein endopeptidase
coiled-coil (db=Coil db_id=coil from=91 to=112 evalue=NA)
O-SIALOGLYCOPROTEIN ENDOPEPTIDASE (db=HMMPanther db_id=PTHR11735 from=1 to=190 evalue=1.1e-50 interpro_id=IPR017861 interpro_description=Peptidase M22, glycoprotease, subgroup GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=2 to=184 evalue=1.3e-43 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD61_11_4

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comp(3990..4589)
DNA (600bp) protein (200aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=182 evalue=6.2e-33)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=27 to=145 evalue=7.0e-18)
Methyltransf_11 (db=HMMPfam db_id=PF08241 from=50 to=139 evalue=1.0e-10 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
ACD61_11_5

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comp(4665..4898)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=54 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
Uncharacterized protein {ECO:0000313|EMBL:EKD53617.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_11_6

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4987..7083
DNA (2097bp) protein (699aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valyl-tRNA synthetase n=5 Tax=Dehalococcoides RepID=SYV_DEHSC (db=UNIREF evalue=2.0e-167 bit_score=593.0 identity=44.38 coverage=97.997138769671)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=47 to=58 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD61_11_7

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comp(7087..7236)
DNA (150bp) protein (50aa)
seg (db=Seg db_id=seg from=12 to=47)
Uncharacterized protein {ECO:0000313|EMBL:EKD53619.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_11_8

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7411..7782
DNA (372bp) protein (124aa)
seg (db=Seg db_id=seg from=12 to=23)
Uncharacterized protein {ECO:0000313|EMBL:EKD53613.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_11_9

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7796..7894
DNA (99bp) protein (33aa)
7796..7894 + (rbs_motif=ATA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD53614.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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