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ACD61_34

Alias: ACD61_343251.4050.6

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_34_1

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comp(688..1074)
DNA (387bp) protein (129aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
ACD61_34_2
Microgenomates bacterium GW2011_GWC1_44_10, Microgenomates, Bacteria

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1297..1581
DNA (285bp) protein (95aa)
30S ribosomal protein S6
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=5 to=92 evalue=2.9e-17 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=4 to=94 evalue=2.2e-14 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=4 to=94 evalue=8.5e-13 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
ACD61_34_3
Microgenomates bacterium GW2011_GWC1_44_10, Microgenomates, Bacteria

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1588..2067
DNA (480bp) protein (160aa)
hypothetical protein
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=4 to=159 evalue=3.9e-48 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=159 evalue=5.0e-46 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=2 to=145 evalue=3.3e-38 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
ACD61_34_4

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2087..2317
DNA (231bp) protein (77aa)
30S ribosomal protein S18
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=7 to=75 evalue=2.6e-18 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S18 (db=HMMPfam db_id=PF01084 from=20 to=70 evalue=1.2e-14 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=1 to=75 evalue=2.0e-14 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD61_34_5

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2344..3564
DNA (1221bp) protein (407aa)
hypothetical protein
seg (db=Seg db_id=seg from=9 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=54 to=393 evalue=5.4e-91 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
Displaying 5 items

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