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ACD61_56

Alias: ACD61_5586.9915.11

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD61_56_1

Not on your lists

comp(3..266)
DNA (264bp) protein (88aa)
seg (db=Seg db_id=seg from=63 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
Uncharacterized protein {ECO:0000313|EMBL:EKD52875.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_56_2

Not on your lists

comp(268..1125)
DNA (858bp) protein (286aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=171 to=190)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=33 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD52876.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_56_3

Not on your lists

comp(1167..1613)
DNA (447bp) protein (149aa)
seg (db=Seg db_id=seg from=134 to=147)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=87 to=106)
Uncharacterized protein {ECO:0000313|EMBL:EKD52877.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_56_4

Not on your lists

1641..2375
DNA (735bp) protein (245aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=206 to=225)
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=196)
transmembrane_regions (db=TMHMM db_id=tmhmm from=141 to=158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
ACD61_56_5

Not on your lists

2362..2745
DNA (384bp) protein (128aa)
coiled-coil (db=Coil db_id=coil from=18 to=39 evalue=NA)
seg (db=Seg db_id=seg from=21 to=37)
seg (db=Seg db_id=seg from=45 to=56)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=91 to=127 evalue=5.7e-09)
ACD61_56_6

Not on your lists

2742..3167
DNA (426bp) protein (142aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=14 to=26)
seg (db=Seg db_id=seg from=53 to=64)
seg (db=Seg db_id=seg from=81 to=94)
ACD61_56_7

Not on your lists

3145..3870
DNA (726bp) protein (242aa)
RluA family pseudouridine synthase
seg (db=Seg db_id=seg from=156 to=167)
PSI_RLU (db=PatternScan db_id=PS01129 from=62 to=76 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=3 to=241 evalue=2.7e-54 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD61_56_8

Not on your lists

3874..5556
DNA (1683bp) protein (561aa)
sodium/hydrogen exchanger
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=107)
ACD61_56_9

Not on your lists

5540..6430
DNA (891bp) protein (297aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD52883.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_56_10

Not on your lists

comp(6436..7140)
DNA (705bp) protein (235aa)
hypothetical protein
TPR repeat-containing protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG23_THET1 (db=UNIREF evalue=2.0e-16 bit_score=89.0 identity=33.16 coverage=77.0212765957447)
seg (db=Seg db_id=seg from=76 to=88)
coiled-coil (db=Coil db_id=coil from=73 to=94 evalue=NA)
ACD61_56_11

Not on your lists

7215..7739
DNA (525bp) protein (175aa)
hypothetical protein
seg (db=Seg db_id=seg from=135 to=145)
seg (db=Seg db_id=seg from=27 to=38)
seg (db=Seg db_id=seg from=153 to=167)
ACD61_56_12

Not on your lists

7741..8565
DNA (825bp) protein (275aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=251 to=273)
transmembrane_regions (db=TMHMM db_id=tmhmm from=222 to=239)
transmembrane_regions (db=TMHMM db_id=tmhmm from=199 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=186)
ACD61_56_13

Not on your lists

comp(9295..9570)
DNA (276bp) protein (92aa)
9295..9570 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD52887.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD61_56_14

Not on your lists

comp(9716..9952)
DNA (237bp) protein (79aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGC7_9EURY (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=39.19 coverage=88.6075949367088)
Uncharacterized protein {ECO:0000313|EMBL:EKD52888.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

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