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ACD62_14

Alias: ACD62_1481.7475.13

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_14_1

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1..180
DNA (180bp) protein (60aa)
seg (db=Seg db_id=seg from=15 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD52109.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_14_2

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322..2001
DNA (1680bp) protein (560aa)
type II secretion system protein E
seg (db=Seg db_id=seg from=176 to=189)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=160 to=557 evalue=5.2e-103)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=291 to=556 evalue=6.4e-88)
ACD62_14_3

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2413..4107
DNA (1695bp) protein (565aa)
rpsA; 30S ribosomal protein S1
rpsA; 30S ribosomal protein S1
Ribosomal protein S1 n=4 Tax=Anaeromyxobacter RepID=A7HCQ7_ANADF (db=UNIREF evalue=1.0e-147 bit_score=527.0 identity=51.76 coverage=94.6902654867257)
seg (db=Seg db_id=seg from=6 to=17)
ACD62_14_4

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4159..5115
DNA (957bp) protein (319aa)
sppA; protein SppA (EC:3.4.21.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=35 to=49)
seg (db=Seg db_id=seg from=120 to=139)
ACD62_14_5

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5145..5486
DNA (342bp) protein (114aa)
integration host factor subunit beta
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=47 to=66 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=3.6e-40 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=91 evalue=5.8e-31 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD62_14_6

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5483..5983
DNA (501bp) protein (167aa)
hit histidine triad protein
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=47 to=164 evalue=7.1e-22 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT-like (db=superfamily db_id=SSF54197 from=1 to=166 evalue=3.6e-38 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=43 to=142 evalue=1.7e-29 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
ACD62_14_7

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6228..7466
DNA (1239bp) protein (413aa)
signal transduction histidine kinase
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=171 to=409 evalue=8.8e-61)
TWO COMPONENT SENSOR HISTIDINE KINASE (PHOR) (db=HMMPanther db_id=PTHR23283:SF34 from=171 to=409 evalue=8.8e-61)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=257 to=412 evalue=2.4e-46 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
Displaying 7 items

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