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ACD62_33

Alias: ACD62_24331.13373.18

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_33_1

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110..835
DNA (726bp) protein (242aa)
4-carboxymuconolactone decarboxylase
4-carboxymuconolactone decarboxylase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLJ3_AGRT5 (db=UNIREF evalue=9.0e-11 bit_score=70.5 identity=32.79 coverage=50.0)
seg (db=Seg db_id=seg from=199 to=208)
seg (db=Seg db_id=seg from=47 to=68)
ACD62_33_2

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870..1229
DNA (360bp) protein (120aa)
carboxymuconolactone decarboxylase family protein
4-carboxymuconolactone decarboxylase n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=A9CLJ3_AGRT5 (db=UNIREF evalue=8.0e-11 bit_score=69.3 identity=34.48 coverage=95.8333333333333)
seg (db=Seg db_id=seg from=84 to=95)
AhpD-like (db=superfamily db_id=SSF69118 from=3 to=116 evalue=3.5e-25)
ACD62_33_3

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1234..4155
DNA (2922bp) protein (974aa)
Histidine kinase (EC:2.7.13.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=388 to=410)
seg (db=Seg db_id=seg from=388 to=408)
ACD62_33_4

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4212..4553
DNA (342bp) protein (114aa)
4212..4553 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD51580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_5

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comp(4640..5911)
DNA (1272bp) protein (424aa)
hypothetical protein
seg (db=Seg db_id=seg from=247 to=258)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=88 to=323 evalue=2.9e-29)
ATP-grasp (db=HMMPfam db_id=PF02222 from=127 to=304 evalue=4.4e-07 interpro_id=IPR003135 interpro_description=ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type)
ACD62_33_6

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comp(5908..6576)
DNA (669bp) protein (223aa)
hypothetical protein
PheT/TilS domain (db=superfamily db_id=SSF56037 from=44 to=219 evalue=1.4e-16 interpro_id=IPR020825 interpro_description=Phenylalanyl-tRNA synthetase, B3/B4)
B3_4 (db=HMMPfam db_id=PF03483 from=63 to=187 evalue=1.4e-08 interpro_id=IPR005146 interpro_description=B3/B4 tRNA-binding domain GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00873 from=60 to=208 evalue=5.0e-05 interpro_id=IPR005146 interpro_description=B3/B4 tRNA-binding domain GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Biological Process: translation (GO:0006412))
ACD62_33_7

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comp(6573..7301)
DNA (729bp) protein (243aa)
hypothetical protein
Conserved domain protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PIQ9_CELJU (db=UNIREF evalue=8.0e-19 bit_score=97.4 identity=29.85 coverage=79.8353909465021)
Uncharacterized protein {ECO:0000313|EMBL:EKD51583.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_8

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comp(7298..8086)
DNA (789bp) protein (263aa)
Biotin synthase 1
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=30 to=164 evalue=4.5e-08)
Uncharacterized protein {ECO:0000313|EMBL:EKD51584.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=L9K8S7_9DELT
ACD62_33_9

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8577..8726
DNA (150bp) protein (50aa)
8577..8726 + (rbs_motif=AGxAGG/AGGxGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD51575.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_10

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comp(10103..10282)
DNA (180bp) protein (60aa)
10103..10282 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51576.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_11

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10765..11229
DNA (465bp) protein (155aa)
seg (db=Seg db_id=seg from=108 to=124)
Uncharacterized protein {ECO:0000313|EMBL:EKD51570.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_12

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11275..11694
DNA (420bp) protein (140aa)
11275..11694 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51571.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_13

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comp(12112..12303)
DNA (192bp) protein (64aa)
12112..12303 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51572.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_33_14

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12406..12705
DNA (300bp) protein (100aa)
groES; co-chaperonin GroES
CHAPERONINS_CPN10 (db=PatternScan db_id=PS00681 from=7 to=31 evalue=0.0 interpro_id=IPR018369 interpro_description=Chaperonin Cpn10, conserved site GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457))
no description (db=HMMSmart db_id=SM00883 from=6 to=98 evalue=1.6e-60 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=99 evalue=1.4e-43 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
ACD62_33_15

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12767..13411
DNA (645bp) protein (215aa)
60 kDa chaperonin 2 n=4 Tax=Anaeromyxobacter RepID=CH602_ANADE (db=UNIREF evalue=4.0e-99 bit_score=363.0 identity=83.64 coverage=99.0697674418605)
groEL; chaperonin GroEL
groEL; chaperonin GroEL
CHAPERONIN-60KDA, CH60 (db=HMMPanther db_id=PTHR11353:SF10 from=2 to=215 evalue=1.6e-149)
Displaying 15 items

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