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ACD62_45

Alias: ACD62_68415.15390.13

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_45_1

Not on your lists

685..1038
DNA (354bp) protein (118aa)
685..1038 + (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50380.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_2

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1090..1989
DNA (900bp) protein (300aa)
seg (db=Seg db_id=seg from=141 to=152)
Uncharacterized protein {ECO:0000313|EMBL:EKD50381.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_3

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1996..2301
DNA (306bp) protein (102aa)
1996..2301 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50382.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_4

Not on your lists

2428..2661
DNA (234bp) protein (78aa)
2428..2661 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD50383.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_5

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comp(2969..5482)
DNA (2514bp) protein (838aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=21 to=30)
seg (db=Seg db_id=seg from=68 to=76)
seg (db=Seg db_id=seg from=339 to=347)
ACD62_45_6

Not on your lists

5559..7289
DNA (1731bp) protein (577aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
seg (db=Seg db_id=seg from=227 to=238)
ACD62_45_7

Not on your lists

7358..7717
DNA (360bp) protein (120aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD50386.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_8

Not on your lists

8250..8471
DNA (222bp) protein (74aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD50377.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_9

Not on your lists

8533..9213
DNA (681bp) protein (227aa)
endonuclease III
nth: endonuclease III (db=HMMTigr db_id=TIGR01083 from=4 to=196 evalue=4.6e-84 interpro_id=IPR005759 interpro_description=Endonuclease III/Nth GO=Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Cellular Component: intracellular (GO:0005622), Biological Process: base-excision repair (GO:0006284))
A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDONUCLEASE III (db=HMMPanther db_id=PTHR10359 from=23 to=206 evalue=1.7e-65)
DNA-glycosylase (db=superfamily db_id=SSF48150 from=2 to=206 evalue=1.2e-58 interpro_id=IPR011257 interpro_description=DNA glycosylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD62_45_10

Not on your lists

9227..9457
DNA (231bp) protein (77aa)
hypothetical protein
Putative ferredoxin n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UNL9_AKKM8 (db=UNIREF evalue=1.0e-21 bit_score=105.0 identity=64.47 coverage=97.4025974025974)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=13 to=72 evalue=5.1e-08)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=13 to=73 evalue=1.5e-07)
ACD62_45_11

Not on your lists

comp(9742..10782)
DNA (1041bp) protein (347aa)
Ferrochelatase n=1 Tax=Herminiimonas arsenicoxydans RepID=HEMH_HERAR (db=UNIREF evalue=7.0e-66 bit_score=254.0 identity=40.3 coverage=94.5244956772334)
hemH; ferrochelatase (EC:4.99.1.1)
FERROCHELATASE (db=PatternScan db_id=PS00534 from=210 to=228 evalue=0.0 interpro_id=IPR019772 interpro_description=Ferrochelatase, active site GO=Molecular Function: ferrochelatase activity (GO:0004325), Biological Process: heme biosynthetic process (GO:0006783))
Ferrochelatase (db=HMMPfam db_id=PF00762 from=22 to=340 evalue=4.1e-90 interpro_id=IPR001015 interpro_description=Ferrochelatase GO=Molecular Function: ferrochelatase activity (GO:0004325), Biological Process: heme biosynthetic process (GO:0006783))
ACD62_45_12

Not on your lists

11016..11885
DNA (870bp) protein (290aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Similar to nicotinate-nucleotide pyrophosphorylase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY31_9BACT (db=UNIREF evalue=2.0e-47 bit_score=192.0 identity=43.31 coverage=93.7931034482759)
seg (db=Seg db_id=seg from=70 to=86)
nadC: nicotinate-nucleotide diphosphorylase (db=HMMTigr db_id=TIGR00078 from=5 to=281 evalue=1.6e-88 interpro_id=IPR004393 interpro_description=Nicotinate-nucleotide pyrophosphorylase GO=Molecular Function: nicotinate-nucleotide diphosphorylase (carboxylating) activity (GO:0004514), Biological Process: pyridine nucleotide biosynthetic process (GO:0019363))
ACD62_45_13

Not on your lists


12085..13353
DNA (1269bp) protein (423aa)
Histidyl-tRNA synthetase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVG2_DESAC (db=UNIREF evalue=8.0e-116 bit_score=421.0 identity=47.96 coverage=97.3995271867612)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=5 to=410 evalue=5.3e-210 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD62_45_14

Not on your lists

13418..13633
DNA (216bp) protein (72aa)
hypothetical protein
Putative uncharacterized protein n=4 Tax=Leptospira biflexa serovar Patoc RepID=B0SBQ8_LEPBA (db=UNIREF evalue=5.0e-11 bit_score=70.1 identity=47.83 coverage=94.4444444444444)
Uncharacterized protein {ECO:0000313|EMBL:EKD50371.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_15

Not on your lists

13630..14010
DNA (381bp) protein (127aa)
pilt protein domain protein
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=123 evalue=1.7e-13)
PIN (db=HMMPfam db_id=PF01850 from=2 to=118 evalue=3.6e-10 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKD50372.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_16

Not on your lists

comp(14057..14512)
DNA (456bp) protein (152aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LSV2_CLOB8 (db=UNIREF evalue=1.0e-22 bit_score=108.0 identity=44.0 coverage=80.2631578947368)
Uncharacterized protein {ECO:0000313|EMBL:EKD50373.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_17

Not on your lists

comp(14552..14941)
DNA (390bp) protein (130aa)
putative nucleic acid-binding protein, contains PIN domain
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=125 evalue=9.8e-14)
PIN (db=HMMPfam db_id=PF01850 from=5 to=119 evalue=3.3e-08 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKD50374.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_45_18

Not on your lists

comp(14931..15152)
DNA (222bp) protein (74aa)
14931..15152 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD50375.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 18 items

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