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ACD62_49

Alias: ACD62_3164.16849.14

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_49_1

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3..197
DNA (195bp) protein (65aa)
seg (db=Seg db_id=seg from=1 to=12)
Uncharacterized protein {ECO:0000313|EMBL:EKD51265.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_2

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288..401
DNA (114bp) protein (38aa)
288..401 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD51266.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_3

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394..1455
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=8 Tax=Bacteroides RepID=A6L4V6_BACV8 (db=UNIREF evalue=4.0e-109 bit_score=398.0 identity=54.4 coverage=96.3276836158192)
hypothetical protein
hypothetical protein
DUF1016 (db=HMMPfam db_id=PF06250 from=20 to=342 evalue=5.8e-82 interpro_id=IPR009362 interpro_description=Protein of unknown function DUF1016)
ACD62_49_4

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1465..1638
DNA (174bp) protein (58aa)
Putative restriction enzyme n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZW06_DESOH (db=UNIREF evalue=5.0e-16 bit_score=86.7 identity=78.43 coverage=86.2068965517241)
putative restriction enzyme
Uncharacterized protein {ECO:0000313|EMBL:EKD51268.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_5

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1669..4392
DNA (2724bp) protein (908aa)
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
glnD; nitrogen regulatory protein P-II uridylyltransferase, GlnD
UTP-GlnB (Protein PII) uridylyltransferase, GlnD n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39VR4_GEOMG (db=UNIREF evalue=1.0e-149 bit_score=534.0 identity=36.79 coverage=91.9603524229075)
[protein PII] uridylyltransferase (db=HMMPIR db_id=PIRSF006288 from=15 to=906 evalue=2.2e-193 interpro_id=IPR010043 interpro_description=Protein-PII uridylyltransferase GO=Biological Process: nitrogen compound metabolic process (GO:0006807), Molecular Function: [protein-PII] uridylyltransferase activity (GO:0008773))
uridylylates and de-uridylylates the small trimeric protein PII. Jill Banfield (11/15/12)
ACD62_49_6

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4389..4631
DNA (243bp) protein (81aa)
seg (db=Seg db_id=seg from=4 to=19)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKD51270.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_7

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4790..5134
DNA (345bp) protein (115aa)
seg (db=Seg db_id=seg from=98 to=113)
seg (db=Seg db_id=seg from=30 to=45)
Uncharacterized protein {ECO:0000313|EMBL:EKD51271.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative histone protein
ACD62_49_8

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5189..6526
DNA (1338bp) protein (446aa)
dimethylallyladenosine tRNA methylthiotransferase
dimethylallyladenosine tRNA methylthiotransferase
(Dimethylallyl)adenosine tRNA methylthiotransferase miaB n=1 Tax=Geobacter metallireducens GS-15 RepID=MIAB_GEOMG (db=UNIREF evalue=9.0e-108 bit_score=394.0 identity=47.86 coverage=96.6367713004484)
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=157 to=177 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
ACD62_49_9

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6604..7104
DNA (501bp) protein (167aa)
hypothetical protein
DUF151 (db=HMMPfam db_id=PF02577 from=7 to=133 evalue=1.6e-44 interpro_id=IPR003729 interpro_description=Protein of unknown function DUF151)
Hypothetical protein TM0160 (db=superfamily db_id=SSF103256 from=3 to=144 evalue=2.2e-42 interpro_id=IPR003729 interpro_description=Protein of unknown function DUF151)
Uncharacterized protein {ECO:0000313|EMBL:EKD51273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_10

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7139..7951
DNA (813bp) protein (271aa)
pgsA1; CDP-alcohol phosphatidyltransferase
seg (db=Seg db_id=seg from=205 to=235)
transmembrane_regions (db=TMHMM db_id=tmhmm from=196 to=218)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250)
ACD62_49_11

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8016..8213
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=15 to=29)
RIBOSOMAL_L35 (db=PatternScan db_id=PS00936 from=5 to=31 evalue=0.0 interpro_id=IPR018265 interpro_description=Ribosomal protein L35, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmI_bact: ribosomal protein L35 (db=HMMTigr db_id=TIGR00001 from=2 to=64 evalue=1.1e-29 interpro_id=IPR001706 interpro_description=Ribosomal protein L35, non-mitochondrial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L35p-like (db=superfamily db_id=SSF143034 from=2 to=65 evalue=1.2e-23)
ACD62_49_12

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8318..8677
DNA (360bp) protein (120aa)
rplT; 50S ribosomal protein L20 RplT
50S ribosomal protein L20 n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=RL20_RHORT (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=59.41 coverage=83.3333333333333)
seg (db=Seg db_id=seg from=2 to=16)
RIBOSOMAL_L20 (db=PatternScan db_id=PS00937 from=54 to=70 evalue=0.0 interpro_id=IPR005813 interpro_description=Ribosomal protein L20 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD62_49_13

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8809..9177
DNA (369bp) protein (123aa)
TraR/DksA family transcriptional regulator
seg (db=Seg db_id=seg from=2 to=18)
ZF_DKSA_1 (db=PatternScan db_id=PS01102 from=84 to=108 evalue=0.0 interpro_id=IPR020458 interpro_description=Zinc finger, DksA/TraR C4-type conserved site)
DnaK suppressor protein DksA, alpha-hairpin domain (db=superfamily db_id=SSF109635 from=1 to=80 evalue=3.1e-17)
ACD62_49_14

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9219..9824
DNA (606bp) protein (202aa)
Conserved hypothetical membrane protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQV0_9DELT (db=UNIREF evalue=3.0e-08 bit_score=61.6 identity=32.59 coverage=64.8514851485149)
hypothetical protein (db=KEGG evalue=5.0e-08 bit_score=60.8 identity=26.7 coverage=82.1782178217822)
seg (db=Seg db_id=seg from=14 to=28)
seg (db=Seg db_id=seg from=140 to=152)
ACD62_49_15

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9961..10563
DNA (603bp) protein (201aa)
seg (db=Seg db_id=seg from=5 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKD51279.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_16

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10686..11834
DNA (1149bp) protein (383aa)
putative Glycosyl transferase, group 1
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=3 to=379 evalue=7.2e-75)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=3 to=376 evalue=3.3e-54)
ACD62_49_17

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11831..13618
DNA (1788bp) protein (596aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=299)
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=341)
ACD62_49_18

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13697..15589
DNA (1893bp) protein (631aa)
acsA; acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) (EC:6.2.1.1)
seg (db=Seg db_id=seg from=251 to=263)
Acetyl-CoA synthetase-like (db=superfamily db_id=SSF56801 from=12 to=621 evalue=7.7e-94)
ACETYL-COENZYME A SYNTHETASE (ACETATE--COA LIGASE) (db=HMMPanther db_id=PTHR11968:SF42 from=32 to=611 evalue=1.1e-61)
ACD62_49_19

Not on your lists

comp(15610..15807)
DNA (198bp) protein (66aa)
coiled-coil (db=Coil db_id=coil from=12 to=33 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD51283.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_49_20

Not on your lists

16047..16886
DNA (840bp) protein (280aa)
type III secretion protein hrpy/hrcu family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
Displaying 20 items

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