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ACD62_51

Alias: ACD62_3774.11786.13

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_51_1

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comp(41..1120)
DNA (1080bp) protein (360aa)
Alanine dehydrogenase n=1 Tax=Anaerococcus prevotii DSM 20548 RepID=C7RE14_ANAPD (db=UNIREF evalue=1.0e-93 bit_score=347.0 identity=50.0 coverage=97.5)
alanine dehydrogenase (EC:1.4.1.1)
alanine dehydrogenase (EC:1.4.1.1)
NADP TRANSHYDROGENASE (db=HMMPanther db_id=PTHR10160 from=1 to=355 evalue=5.9e-146)
ACD62_51_2

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1302..1955
DNA (654bp) protein (218aa)
pgsA_1; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=119)
ACD62_51_3

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2058..2402
DNA (345bp) protein (115aa)
hydrogenase nickel incorporation protein HypA
HYPA (db=PatternScan db_id=PS01249 from=34 to=76 evalue=0.0 interpro_id=IPR020538 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF, conserved site)
HypA (db=HMMPfam db_id=PF01155 from=1 to=111 evalue=7.4e-28 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
HypA (db=HAMAP db_id=MF_00213 from=1 to=112 evalue=20.818 interpro_id=IPR000688 interpro_description=Hydrogenase nickel incorporation protein HypA/HybF GO=Biological Process: protein modification process (GO:0006464), Molecular Function: nickel ion binding (GO:0016151))
ACD62_51_4

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2414..3067
DNA (654bp) protein (218aa)
hydrogenase nickel incorporation protein HypB
Hydrogenase accessory protein HypB n=1 Tax=Dickeya dadantii Ech703 RepID=C6C9A4_DICDC (db=UNIREF evalue=1.0e-56 bit_score=222.0 identity=52.38 coverage=95.8715596330275)
hypB: hydrogenase accessory protein HypB (db=HMMTigr db_id=TIGR00073 from=1 to=215 evalue=2.3e-85 interpro_id=IPR004392 interpro_description=Hydrogenase accessory protein HypB GO=Biological Process: protein complex assembly (GO:0006461), Molecular Function: nickel ion binding (GO:0016151))
Ni(2+)-binding GTPase, [NiFe]-hydrogenase/urease maturation factor (db=HMMPIR db_id=PIRSF005624 from=1 to=217 evalue=4.6e-83 interpro_id=IPR012202 interpro_description=[NiFe]-hydrogenase/urease maturation factor, Ni(2+)-binding GTPase GO=Molecular Function: nickel ion binding (GO:0016151))
ACD62_51_5

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3064..5493
DNA (2430bp) protein (810aa)
(NiFe) hydrogenase maturation protein HypF
(NiFe) hydrogenase maturation protein HypF
(NiFe) hydrogenase maturation protein HypF n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FG28_DESAA (db=UNIREF evalue=0.0 bit_score=689.0 identity=46.46 coverage=90.4938271604938)
seg (db=Seg db_id=seg from=5 to=16)
ACD62_51_6

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5568..5783
DNA (216bp) protein (72aa)
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
seg (db=Seg db_id=seg from=7 to=16)
HupF_HypC (db=HMMPfam db_id=PF01455 from=1 to=61 evalue=2.0e-15 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
hypC_hupF: hydrogenase assembly chaperone H (db=HMMTigr db_id=TIGR00074 from=22 to=65 evalue=3.6e-11 interpro_id=IPR001109 interpro_description=Hydrogenase expression/formation protein, HupF/HypC)
ACD62_51_7

Not on your lists

5810..6877
DNA (1068bp) protein (356aa)
hypD; hydrogenase expression/formation protein HypD
hypD; hydrogenase expression/formation protein HypD
Hydrogenase expression/formation protein HypD n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKT3_THEYD (db=UNIREF evalue=1.0e-105 bit_score=386.0 identity=54.25 coverage=95.5056179775281)
seg (db=Seg db_id=seg from=136 to=148)
ACD62_51_8

Not on your lists

6888..7949
DNA (1062bp) protein (354aa)
Hydrogenase expression/formation protein HypE n=1 Tax=Thermincola sp. JR RepID=D5XEU2_9FIRM (db=UNIREF evalue=8.0e-90 bit_score=333.0 identity=51.48 coverage=94.6327683615819)
hydrogenase expression/formation protein HypE
hydrogenase expression/formation protein HypE
hypE: hydrogenase expression/formation prote (db=HMMTigr db_id=TIGR02124 from=20 to=353 evalue=4.8e-167 interpro_id=IPR011854 interpro_description=Hydrogenase expression/formation protein HypE)
ACD62_51_9

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8059..9381
DNA (1323bp) protein (441aa)
AAA ATPase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQ85_9DELT (db=UNIREF evalue=1.0e-30 bit_score=138.0 identity=29.05 coverage=82.766439909297)
putative ATPase (AAA+ superfamily)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=16 to=234 evalue=1.4e-17)
AAA ATPase {ECO:0000313|EMBL:EKD51131.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_51_10

Not on your lists

9785..11383
DNA (1599bp) protein (533aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=35)
seg (db=Seg db_id=seg from=197 to=210)
Metalloproteases ("zincins"), catalytic domain (db=superfamily db_id=SSF55486 from=52 to=279 evalue=5.2e-20)
no description (db=Gene3D db_id=G3DSA:3.40.390.10 from=52 to=279 evalue=1.9e-07)
ACD62_51_11

Not on your lists

11415..11630
DNA (216bp) protein (72aa)
11415..11630 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51133.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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