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ACD62_64

Alias: ACD62_19450.25245.15

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_64_1

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1..1101
DNA (1101bp) protein (367aa)
Glycoside hydrolase, family 39 n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FMM6_METHJ (db=UNIREF evalue=4.0e-13 bit_score=79.3 identity=25.83 coverage=79.291553133515)
glycoside hydrolase family protein (db=KEGG evalue=4.0e-13 bit_score=79.3 identity=25.83 coverage=79.291553133515)
seg (db=Seg db_id=seg from=144 to=157)
(Trans)glycosidases (db=superfamily db_id=SSF51445 from=15 to=268 evalue=2.1e-11 interpro_id=IPR017853 interpro_description=Glycoside hydrolase, catalytic core)
family 39 - plant based degradation kelly wrighton (11/15/12)
ACD62_64_2

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1114..3924
DNA (2811bp) protein (937aa)
Excinuclease ABC, A subunit n=3 Tax=Geobacter RepID=B5E9A0_GEOBB (db=UNIREF evalue=0.0 bit_score=1137.0 identity=58.49 coverage=99.5731056563501)
excinuclease ABC subunit A
excinuclease ABC subunit A
seg (db=Seg db_id=seg from=656 to=668)
ACD62_64_3

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4538..5875
DNA (1338bp) protein (446aa)
seg (db=Seg db_id=seg from=191 to=201)
seg (db=Seg db_id=seg from=144 to=155)
seg (db=Seg db_id=seg from=334 to=344)
PhdYeFM (db=HMMPfam db_id=PF02604 from=13 to=60 evalue=1.4e-08 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
ACD62_64_4

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5887..6597
DNA (711bp) protein (237aa)
5887..6597 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_64_5

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6600..7931
DNA (1332bp) protein (444aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein n=3 Tax=Anaeromyxobacter RepID=B4UKZ1_ANASK (db=UNIREF evalue=2.0e-126 bit_score=456.0 identity=50.23 coverage=97.5225225225225)
seg (db=Seg db_id=seg from=258 to=266)
ACD62_64_6

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7992..9392
DNA (1401bp) protein (467aa)
pyruvate kinase
Pyruvate kinase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUG4_CHLT3 (db=UNIREF evalue=8.0e-79 bit_score=298.0 identity=39.0 coverage=95.93147751606)
seg (db=Seg db_id=seg from=138 to=148)
PYRUVATE KINASE (db=HMMPanther db_id=PTHR11817 from=3 to=450 evalue=3.0e-138 interpro_id=IPR001697 interpro_description=Pyruvate kinase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: pyruvate kinase activity (GO:0004743), Biological Process: glycolysis (GO:0006096), Molecular Function: potassium ion binding (GO:0030955))
ACD62_64_7

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comp(9451..10500)
DNA (1050bp) protein (350aa)
seg (db=Seg db_id=seg from=48 to=59)
seg (db=Seg db_id=seg from=67 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKD51902.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_64_8

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comp(10628..11980)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MU02_VIBHB (db=UNIREF evalue=6.0e-82 bit_score=308.0 identity=42.45 coverage=89.1352549889135)
ATPase AAA
ATPase AAA
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=2 to=264 evalue=5.7e-14)
ACD62_64_9

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comp(12072..12440)
DNA (369bp) protein (123aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=16)
Uncharacterized protein {ECO:0000313|EMBL:EKD51904.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SF87_PROVI
ACD62_64_10

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comp(12471..13268)
DNA (798bp) protein (266aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EHR3_BRASB (db=UNIREF evalue=5.0e-22 bit_score=108.0 identity=30.86 coverage=89.0977443609023)
seg (db=Seg db_id=seg from=170 to=183)
Hypoth_Ymh (db=HMMPfam db_id=PF09509 from=137 to=259 evalue=6.0e-25 interpro_id=IPR012654 interpro_description=Conserved hypothetical protein CHP02391)
ACD62_64_11

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comp(13454..14611)
DNA (1158bp) protein (386aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD51906.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_64_12
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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15248..16636
DNA (1389bp) protein (463aa)
phosphoenolpyruvate carboxykinase (GTP)
phosphoenolpyruvate carboxykinase (GTP)
Phosphoenolpyruvate carboxykinase n=1 Tax=uncultured archaeon RepID=D1JEQ1_9ARCH (db=UNIREF evalue=8.0e-122 bit_score=441.0 identity=50.71 coverage=90.0647948164147)
seg (db=Seg db_id=seg from=443 to=456)
ACD62_64_13

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16692..17183
DNA (492bp) protein (164aa)
phosphoenolpyruvate carboxykinase (GTP)
PEPCK (db=HMMPfam db_id=PF00821 from=1 to=145 evalue=1.3e-28 interpro_id=IPR008209 interpro_description=Phosphoenolpyruvate carboxykinase, GTP-utilising GO=Molecular Function: phosphoenolpyruvate carboxykinase activity (GO:0004611), Molecular Function: GTP binding (GO:0005525), Biological Process: gluconeogenesis (GO:0006094))
PEP carboxykinase-like (db=superfamily db_id=SSF53795 from=1 to=147 evalue=1.6e-25)
no description (db=Gene3D db_id=G3DSA:3.90.228.20 from=1 to=147 evalue=1.5e-21 interpro_id=IPR013035 interpro_description=Phosphoenolpyruvate carboxykinase, C-terminal GO=Molecular Function: phosphoenolpyruvate carboxykinase activity (GO:0004611), Biological Process: gluconeogenesis (GO:0006094), Molecular Function: purine nucleotide binding (GO:0017076))
ACD62_64_14

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comp(17320..18471)
DNA (1152bp) protein (384aa)
putative lipoprotein
Putative lipoprotein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MLH9_BDEBA (db=UNIREF evalue=2.0e-30 bit_score=137.0 identity=27.39 coverage=80.9895833333333)
Quinoprotein alcohol dehydrogenase-like (db=superfamily db_id=SSF50998 from=38 to=314 evalue=1.8e-47 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
no description (db=Gene3D db_id=G3DSA:2.140.10.10 from=35 to=179 evalue=5.4e-20 interpro_id=IPR011047 interpro_description=Quinonprotein alcohol dehydrogenase-like)
ACD62_64_15

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comp(18486..19190)
DNA (705bp) protein (235aa)
seg (db=Seg db_id=seg from=221 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
coiled-coil (db=Coil db_id=coil from=74 to=95 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD51889.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_64_16

Not on your lists

comp(19216..20316)
DNA (1101bp) protein (367aa)
Glutamyl-tRNA reductase n=1 Tax=Magnetococcus sp. MC-1 RepID=HEM1_MAGSM (db=UNIREF evalue=7.0e-64 bit_score=248.0 identity=40.83 coverage=90.1907356948229)
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase (db=HMMPIR db_id=PIRSF000445 from=1 to=366 evalue=4.9e-101 interpro_id=IPR000343 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
hemA: glutamyl-tRNA reductase (db=HMMTigr db_id=TIGR01035 from=3 to=361 evalue=1.6e-78 interpro_id=IPR000343 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
ACD62_64_17

Not on your lists

comp(20313..21104)
DNA (792bp) protein (264aa)
cytochrome c assembly protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=248 to=263)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=262)
ACD62_64_18

Not on your lists

comp(21115..21723)
DNA (609bp) protein (203aa)
nucleoside-triphosphatase
Nucleoside-triphosphatase n=70 Tax=Bacillus cereus group RepID=NTPA_BACCZ (db=UNIREF evalue=6.0e-35 bit_score=150.0 identity=47.03 coverage=96.551724137931)
seg (db=Seg db_id=seg from=74 to=88)
INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN (db=HMMPanther db_id=PTHR11067 from=1 to=201 evalue=9.8e-68 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
ACD62_64_19

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comp(21720..22436)
DNA (717bp) protein (239aa)
Ribonuclease PH n=1 Tax=Dechloromonas aromatica RCB RepID=RNPH_DECAR (db=UNIREF evalue=4.0e-79 bit_score=297.0 identity=62.93 coverage=96.652719665272)
rph; ribonuclease PH
RIBONUCLEASE_PH (db=PatternScan db_id=PS01277 from=120 to=132 evalue=0.0 interpro_id=IPR018336 interpro_description=Ribonuclease PH, conserved site)
RNasePH: ribonuclease PH (db=HMMTigr db_id=TIGR01966 from=8 to=237 evalue=1.3e-146 interpro_id=IPR002381 interpro_description=Ribonuclease phosphorolytic, bacterial-type GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: tRNA-specific ribonuclease activity (GO:0004549), Biological Process: tRNA processing (GO:0008033))
ACD62_64_20

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comp(22433..23203)
DNA (771bp) protein (257aa)
Glycosyl transferase family 2 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FKY1_DESAA (db=UNIREF evalue=8.0e-61 bit_score=237.0 identity=50.84 coverage=90.272373540856)
family 2 glycosyl transferase
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=241 evalue=9.6e-54)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=3 to=227 evalue=2.7e-53)
ACD62_64_21

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comp(23373..23651)
DNA (279bp) protein (93aa)
TonB family protein
TonB (db=HMMPfam db_id=PF03544 from=21 to=79 evalue=5.2e-17 interpro_id=IPR006260 interpro_description=TonB, C-terminal GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein transport (GO:0015031), Cellular Component: membrane (GO:0016020), Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
tonB_Cterm: TonB family C-terminal domain (db=HMMTigr db_id=TIGR01352 from=21 to=92 evalue=6.1e-17 interpro_id=IPR006260 interpro_description=TonB, C-terminal GO=Molecular Function: protein transporter activity (GO:0008565), Biological Process: protein transport (GO:0015031), Cellular Component: membrane (GO:0016020), Cellular Component: outer membrane-bounded periplasmic space (GO:0030288))
TolA/TonB C-terminal domain (db=superfamily db_id=SSF74653 from=3 to=92 evalue=7.2e-15)
ACD62_64_22

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24010..24729
DNA (720bp) protein (240aa)
seg (db=Seg db_id=seg from=101 to=110)
Uncharacterized protein {ECO:0000313|EMBL:EKD51885.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_64_23

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comp(24764..25282)
DNA (519bp) protein (173aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=36)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
seg (db=Seg db_id=seg from=41 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKD51886.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 23 items

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