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ACD62_69

Alias: ACD62_18313.18995.14

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_69_1

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comp(3..410)
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GX65_FLAPJ (db=UNIREF evalue=9.0e-32 bit_score=139.0 identity=49.66 coverage=98.5294117647059)
hypothetical protein
1,3-PROPANEDIOL DEHYDROGENASE-RELATED (db=HMMPanther db_id=PTHR12213 from=1 to=134 evalue=7.0e-48 interpro_id=IPR017858 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
Cob_adeno_trans (db=HMMPfam db_id=PF01923 from=3 to=135 evalue=4.1e-46 interpro_id=IPR002779 interpro_description=Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: cob(I)yrinic acid a,c-diamide adenosyltransferase activity (GO:0008817), Biological Process: cobalamin biosynthetic process (GO:0009236))
ACD62_69_2

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516..1184
DNA (669bp) protein (223aa)
metallo-beta-lactamase family protein
Metallo-beta-lactamase family protein n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YL18_THEYD (db=UNIREF evalue=1.0e-44 bit_score=182.0 identity=44.59 coverage=91.4798206278027)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=222 evalue=1.3e-49)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=3 to=222 evalue=1.2e-46)
ACD62_69_3

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1344..1538
DNA (195bp) protein (65aa)
30S ribosomal protein S21
30S ribosomal protein S21 n=4 Tax=Anaeromyxobacter RepID=RS21_ANAD2 (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=72.09 coverage=64.6153846153846)
seg (db=Seg db_id=seg from=44 to=55)
Ribosomal_S21 (db=HMMPfam db_id=PF01165 from=3 to=56 evalue=8.5e-22 interpro_id=IPR001911 interpro_description=Ribosomal protein S21 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_69_4

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1674..2024
DNA (351bp) protein (117aa)
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 n=1 Tax=Pelobacter propionicus DSM 2379 RepID=RS6_PELPD (db=UNIREF evalue=2.0e-14 bit_score=81.6 identity=41.0 coverage=84.6153846153846)
RIBOSOMAL_S6 (db=PatternScan db_id=PS01048 from=47 to=56 evalue=0.0 interpro_id=IPR020815 interpro_description=Ribosomal protein S6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=5 to=96 evalue=2.8e-25 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD62_69_5
unknown

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2099..2275
DNA (177bp) protein (59aa)
seg (db=Seg db_id=seg from=4 to=15)
ACD62_69_6

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2214..2486
DNA (273bp) protein (91aa)
ribosomal protein S18
30S ribosomal protein S18 n=2 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QYT5_9DELT (db=UNIREF evalue=2.0e-17 bit_score=91.7 identity=63.24 coverage=73.6263736263736)
seg (db=Seg db_id=seg from=4 to=15)
S18: ribosomal protein S18 (db=HMMTigr db_id=TIGR00165 from=16 to=85 evalue=3.0e-23 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD62_69_7

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2624..3766
DNA (1143bp) protein (381aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
seg (db=Seg db_id=seg from=132 to=144)
seg (db=Seg db_id=seg from=41 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=340 to=362)
ACD62_69_8

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3986..4855
DNA (870bp) protein (290aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=ISPE_PELPD (db=UNIREF evalue=3.0e-58 bit_score=229.0 identity=44.81 coverage=90.0)
seg (db=Seg db_id=seg from=96 to=109)
4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase (db=HMMPIR db_id=PIRSF010376 from=2 to=289 evalue=2.0e-89 interpro_id=IPR004424 interpro_description=4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO=Biological Process: terpenoid biosynthetic process (GO:0016114), Molecular Function: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity (GO:0050515))
ACD62_69_9

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5002..5403
DNA (402bp) protein (134aa)
regulatory protein SpoVG
SpoVG (db=HMMPfam db_id=PF04026 from=2 to=83 evalue=2.6e-33 interpro_id=IPR007170 interpro_description=Sporulation stage V, protein G GO=Biological Process: sporulation resulting in formation of a cellular spore (GO:0030435))
Uncharacterized protein {ECO:0000313|EMBL:EKD51927.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Putative septation protein SpoVG n=3 Tax=Anaeromyxobacter RepID=SP5G_ANAD2
ACD62_69_10

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comp(5418..6149)
DNA (732bp) protein (244aa)
vitamin B12 ABC transporter ATPase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=139 to=153 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
METAL ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF31 from=10 to=240 evalue=6.2e-78)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=240 evalue=6.2e-78)
ACD62_69_11

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comp(6774..7286)
DNA (513bp) protein (171aa)
hypothetical protein
seg (db=Seg db_id=seg from=129 to=147)
Uncharacterized protein {ECO:0000313|EMBL:EKD51929.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_69_12

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7586..7936
DNA (351bp) protein (117aa)
7586..7936 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD51921.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_69_13

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8141..8254
DNA (114bp) protein (38aa)
8141..8254 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD51922.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_69_14

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comp(8640..10727)
DNA (2088bp) protein (696aa)
translation elongation factor G
translation elongation factor G
Translation elongation factor G n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R093_9DELT (db=UNIREF evalue=0.0 bit_score=881.0 identity=62.97 coverage=97.8448275862069)
seg (db=Seg db_id=seg from=98 to=112)
ACD62_69_15

Not on your lists

11410..11946
DNA (537bp) protein (179aa)
radical SAM protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=1 to=159 evalue=2.9e-13)
Uncharacterized protein {ECO:0000313|EMBL:EKD51914.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Radical SAM protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LNL2_9PROT
ACD62_69_16

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comp(11958..12824)
DNA (867bp) protein (289aa)
Mg2 transporter protein CorA family protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KAP1_ELUMP (db=UNIREF evalue=2.0e-89 bit_score=332.0 identity=54.36 coverage=98.961937716263)
putative Divalent metal ion transporter
putative Divalent metal ion transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
ACD62_69_17

Not on your lists

13099..14811
DNA (1713bp) protein (571aa)
seg (db=Seg db_id=seg from=487 to=501)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
Uncharacterized protein {ECO:0000313|EMBL:EKD51916.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_69_18

Not on your lists

comp(14891..16693)
DNA (1803bp) protein (601aa)
Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GBY9_9DELT (db=UNIREF evalue=1.0e-12 bit_score=79.0 identity=23.26 coverage=59.9001663893511)
hypothetical protein (db=KEGG evalue=5.0e-07 bit_score=60.1 identity=23.06 coverage=58.5690515806988)
seg (db=Seg db_id=seg from=29 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
ACD62_69_19

Not on your lists

comp(16690..17286)
DNA (597bp) protein (199aa)
Sua5/YciO/YrdC/YwlC family protein
YrdC/RibB (db=superfamily db_id=SSF55821 from=5 to=198 evalue=3.6e-50 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
no description (db=Gene3D db_id=G3DSA:3.90.870.10 from=5 to=193 evalue=2.9e-48 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=11 to=184 evalue=3.3e-47 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
ACD62_69_20

Not on your lists

comp(17287..17982)
DNA (696bp) protein (232aa)
Transcriptional regulator, TetR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GH28_SORC5 (db=UNIREF evalue=2.0e-13 bit_score=79.0 identity=27.92 coverage=82.7586206896552)
hypothetical protein
Homeodomain-like (db=superfamily db_id=SSF46689 from=11 to=89 evalue=2.9e-16 interpro_id=IPR009057 interpro_description=Homeodomain-like)
TetR_N (db=HMMPfam db_id=PF00440 from=19 to=65 evalue=5.8e-16 interpro_id=IPR001647 interpro_description=Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD62_69_21

Not on your lists

18098..19033
DNA (936bp) protein (312aa)
cytosol aminopeptidase (EC:3.4.11.1)
LEUCINE AMINOPEPTIDASE-RELATED (db=HMMPanther db_id=PTHR11963 from=32 to=312 evalue=1.5e-62)
LEUCINE AMINOPEPTIDASE (db=HMMPanther db_id=PTHR11963:SF3 from=32 to=312 evalue=1.5e-62 interpro_id=IPR011356 interpro_description=Peptidase M17, leucyl aminopeptidase GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: cytoplasm (GO:0005737), Molecular Function: metalloexopeptidase activity (GO:0008235), Biological Process: protein metabolic process (GO:0019538), Molecular Function: manganese ion binding (GO:0030145))
Zn-dependent exopeptidases (db=superfamily db_id=SSF53187 from=176 to=312 evalue=5.3e-40)
Displaying 21 items

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