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ACD62_85

Alias: ACD62_81685.5378.15

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_85_1
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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253..744
DNA (492bp) protein (164aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Geobacter sulfurreducens RepID=Q74G80_GEOSL (db=UNIREF evalue=1.0e-34 bit_score=148.0 identity=45.14 coverage=87.1951219512195)
yhcC-1; radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=15 to=150 evalue=5.8e-09)
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
ACD62_85_2
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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854..1333
DNA (480bp) protein (160aa)
hypothetical protein
Radical SAM enzymes (db=superfamily db_id=SSF102114 from=24 to=112 evalue=3.7e-14)
radical SAM protein, TIGR01212 family Tax=GWA2_Deltaproteobacteria_45_12_curated
hypothetical protein; K07139 alias=ACD73_C00387G00003,ACD73p_28644.10436.6_3,ACD73p_28644.10436.6G0003 id=110293 tax=ACD73 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=Unknown
ACD62_85_3

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1476..1889
DNA (414bp) protein (138aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=8 to=19)
Uncharacterized protein {ECO:0000313|EMBL:EKD50149.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_85_4

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comp(1892..2362)
DNA (471bp) protein (157aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=89)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD50150.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_85_5

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comp(2870..3559)
DNA (690bp) protein (230aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
seg (db=Seg db_id=seg from=27 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
PS_decarb_rel: phosphatidylserine decar (db=HMMTigr db_id=TIGR00164 from=20 to=229 evalue=2.0e-53 interpro_id=IPR004428 interpro_description=Phosphatidylserine decarboxylase-related protein GO=Molecular Function: phosphatidylserine decarboxylase activity (GO:0004609), Biological Process: phosphatidylethanolamine biosynthetic process (GO:0006646), Molecular Function: cofactor binding (GO:0048037))
ACD62_85_6

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comp(3570..4058)
DNA (489bp) protein (163aa)
acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SB67_THISK (db=UNIREF evalue=5.0e-35 bit_score=149.0 identity=49.37 coverage=95.7055214723926)
seg (db=Seg db_id=seg from=122 to=138)
acolac_sm: acetolactate synthase, small sub (db=HMMTigr db_id=TIGR00119 from=1 to=158 evalue=8.9e-52 interpro_id=IPR004789 interpro_description=Acetolactate synthase, small subunit GO=Molecular Function: acetolactate synthase activity (GO:0003984), Biological Process: branched chain family amino acid biosynthetic process (GO:0009082))
ACD62_85_7

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comp(4193..4432)
DNA (240bp) protein (80aa)
seg (db=Seg db_id=seg from=57 to=70)
Uncharacterized protein {ECO:0000313|EMBL:EKD50146.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_85_8

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comp(4719..5147)
DNA (429bp) protein (143aa)
Arginine pathway regulatory protein ArgR, repressor of arg regulon
Arginine repressor n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D266_MYXXD (db=UNIREF evalue=2.0e-11 bit_score=71.6 identity=40.38 coverage=71.3286713286713)
seg (db=Seg db_id=seg from=25 to=35)
ARGREPRESSOR (db=FPrintScan db_id=PR01467 from=109 to=124 evalue=3.2e-16 interpro_id=IPR001669 interpro_description=Arginine repressor GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD62_85_9

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5250..5414
DNA (165bp) protein (55aa)
5250..5414 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50148.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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