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ACD62_93

Alias: ACD62_27907.7435.12

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_93_1

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comp(3..1841)
DNA (1839bp) protein (613aa)
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D233_MYXXD (db=UNIREF evalue=4.0e-159 bit_score=565.0 identity=52.03 coverage=93.9641109298532)
seg (db=Seg db_id=seg from=2 to=12)
ACD62_93_2

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comp(1841..2236)
DNA (396bp) protein (132aa)
S23 ribosomal protein
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=11 to=120 evalue=2.7e-33 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal {ECO:0000313|EMBL:EKD51448.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S23 ribosomal protein n=1 Tax=sediment metagenome RepID=D9PHY6_9ZZZZ
ACD62_93_3

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comp(2283..2600)
DNA (318bp) protein (106aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Thiolase n=2 Tax=Geobacter RepID=Q39TY7_GEOMG (db=UNIREF evalue=3.0e-29 bit_score=130.0 identity=62.64 coverage=84.9056603773585)
seg (db=Seg db_id=seg from=92 to=102)
THIOLASE_2 (db=PatternScan db_id=PS00737 from=51 to=67 evalue=0.0 interpro_id=IPR020613 interpro_description=Thiolase, conserved site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring acyl groups other than amino-acyl groups (GO:0016747))
ACD62_93_4

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comp(3736..4335)
DNA (600bp) protein (200aa)
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C).
HAD-like (db=superfamily db_id=SSF56784 from=1 to=197 evalue=2.0e-12)
NT5C (db=HMMPfam db_id=PF06941 from=3 to=195 evalue=1.2e-11 interpro_id=IPR010708 interpro_description=5'(3')-deoxyribonucleotidase GO=Molecular Function: phosphatase activity (GO:0016791))
5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) {ECO:0000313|EMBL:EKD51443.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_93_5

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comp(4345..5478)
DNA (1134bp) protein (378aa)
hypothetical protein
Rsm22 (db=HMMPfam db_id=PF09243 from=179 to=273 evalue=2.0e-09 interpro_id=IPR015324 interpro_description=Ribosomal protein Rsm22, bacterial-type GO=Biological Process: translation (GO:0006412), Molecular Function: methyltransferase activity (GO:0008168))
Uncharacterized protein {ECO:0000313|EMBL:EKD51444.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ribosomal small subunit Rsm22 alias=ACD73_C00105G00003,ACD73_226275.6503.5G0003,ACD73_226275.6503.5_3 id=108827 tax=ACD73 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=Unknown
ACD62_93_6

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comp(5475..6221)
DNA (747bp) protein (249aa)
Crp/Fnr family transcriptional regulator
Transcriptional regulatory protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWX5_9BACT (db=UNIREF evalue=2.0e-49 bit_score=199.0 identity=48.46 coverage=90.3614457831325)
seg (db=Seg db_id=seg from=167 to=178)
coiled-coil (db=Coil db_id=coil from=145 to=166 evalue=NA)
ACD62_93_7

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6345..7436
DNA (1092bp) protein (364aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=343 to=362)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
seg (db=Seg db_id=seg from=262 to=273)
Displaying 7 items

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