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ACD62_114

Alias: ACD62_181.8330.14

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_114_1

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69..980
DNA (912bp) protein (304aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9M8_PHYPA (db=UNIREF evalue=1.0e-113 bit_score=412.0 identity=63.55 coverage=97.6973684210526)
ornithine carbamoyltransferase
ornithine carbamoyltransferase
orni_carb_tr: ornithine carbamoyltransfe (db=HMMTigr db_id=TIGR00658 from=3 to=303 evalue=6.1e-136 interpro_id=IPR002292 interpro_description=Ornithine carbamoyltransferase GO=Molecular Function: ornithine carbamoyltransferase activity (GO:0004585), Biological Process: cellular amino acid metabolic process (GO:0006520), Cellular Component: ornithine carbamoyltransferase complex (GO:0009348))
ACD62_114_2

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1177..2493
DNA (1317bp) protein (439aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LE97_SYNFM (db=UNIREF evalue=3.0e-169 bit_score=598.0 identity=64.29 coverage=98.6332574031891)
seg (db=Seg db_id=seg from=182 to=192)
ACD62_114_3

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comp(2558..3082)
DNA (525bp) protein (175aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
Uncharacterized protein {ECO:0000313|EMBL:EKD51944.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_114_4

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comp(3186..4442)
DNA (1257bp) protein (419aa)
seg (db=Seg db_id=seg from=18 to=35)
seg (db=Seg db_id=seg from=57 to=68)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD51934.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_114_5

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comp(4615..5451)
DNA (837bp) protein (279aa)
hypothetical protein
Fsuc_second: hypothetical protein, TIGR02 (db=HMMTigr db_id=TIGR02147 from=7 to=277 evalue=1.7e-96 interpro_id=IPR011873 interpro_description=Conserved hypothetical protein CHP02147)
Uncharacterized protein {ECO:0000313|EMBL:EKD51935.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein, TIGR02147 alias=ACD73_C00113G00004,ACD73_207312.6370.6G0004,ACD73_207312.6370.6_4 id=108889 tax=ACD73 species=Fibrobacter succinogenes genus=Fibrobacter taxon_order=Fibrobacterales taxon_class=Fibrobacteria phylum=Fibrobacteres organism_desc=Unknown
ACD62_114_6

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comp(5633..6136)
DNA (504bp) protein (168aa)
5633..6136 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD51936.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_114_7

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6413..6649
DNA (237bp) protein (79aa)
Helix-turn-helix protein, CopG n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NNY3_9DELT (db=UNIREF evalue=4.0e-08 bit_score=60.5 identity=50.0 coverage=74.6835443037975)
Helix-turn-helix protein, CopG {ECO:0000313|EMBL:EKD51937.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_114_8

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6682..6960
DNA (279bp) protein (93aa)
plasmid stabilization protein
RelE-like (db=superfamily db_id=SSF143011 from=1 to=91 evalue=1.2e-14)
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=15 to=86 evalue=4.6e-07 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
Uncharacterized protein {ECO:0000313|EMBL:EKD51938.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_114_9

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comp(6969..7385)
DNA (417bp) protein (139aa)
hypothetical protein
Probable Lactoylglutathione lyase and related lyases n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FV49_SORC5 (db=UNIREF evalue=4.0e-13 bit_score=77.0 identity=35.71 coverage=84.8920863309353)
seg (db=Seg db_id=seg from=103 to=113)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=135 evalue=4.9e-16)
ACD62_114_10

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comp(7382..7789)
DNA (408bp) protein (136aa)
hemerythrin-like metal-binding protein
Hemerythrin-like metal-binding protein n=2 Tax=Thermincola sp. JR RepID=D5XBY5_9FIRM (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=42.11 coverage=97.0588235294118)
HEMERYTHRINS (db=PatternScan db_id=PS00550 from=58 to=81 evalue=0.0 interpro_id=IPR016131 interpro_description=Haemerythrin, iron-binding site GO=Molecular Function: metal ion binding (GO:0046872))
hemeryth_dom: hemerythrin-like metal-bin (db=HMMTigr db_id=TIGR02481 from=5 to=129 evalue=3.4e-38 interpro_id=IPR012827 interpro_description=Haemerythrin-like, metal-binding GO=Molecular Function: metal ion binding (GO:0046872))
ACD62_114_11

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comp(7960..8367)
DNA (408bp) protein (136aa)
2-nitropropane dioxygenase
NPD (db=HMMPfam db_id=PF03060 from=1 to=121 evalue=8.8e-21 interpro_id=IPR004136 interpro_description=2-nitropropane dioxygenase, NPD GO=Molecular Function: 2-nitropropane dioxygenase activity (GO:0018580), Biological Process: oxidation reduction (GO:0055114))
Inosine monophosphate dehydrogenase (IMPDH) (db=superfamily db_id=SSF51412 from=2 to=130 evalue=1.3e-13)
Uncharacterized protein {ECO:0000313|EMBL:EKD51941.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
confirm with phylogeny: may encode P3N monooxygenase rather than 2-nitropropane dioxygenase kelly wrighton (11/15/12)
Displaying 11 items

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