Alias: ACD62_4546.9434.19
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD62_139_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..122)
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seg (db=Seg db_id=seg from=13 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD50895.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD62_139_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(154..681)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
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ACD62_139_3
uncultured bacterium, Bacteria
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Not on your lists |
833..1738
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Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BZI0_DESAD (db=UNIREF evalue=1.0e-07 bit_score=60.8 identity=26.37 coverage=61.9205298013245)
hypothetical protein (db=KEGG evalue=1.0e-07 bit_score=60.8 identity=26.37 coverage=61.9205298013245)
seg (db=Seg db_id=seg from=262 to=276)
transmembrane_regions (db=TMHMM db_id=tmhmm from=30 to=52)
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ACD62_139_4
uncultured bacterium, Bacteria
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Not on your lists |
1745..2641
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NagC; transcriptional regulator
ROK family protein n=1 Tax=beta proteobacterium KB13 RepID=B6BVI8_9PROT (db=UNIREF evalue=1.0e-43 bit_score=180.0 identity=36.88 coverage=96.3210702341137)
ROK (db=PatternScan db_id=PS01125 from=137 to=164 evalue=0.0 interpro_id=IPR000600 interpro_description=ROK)
ROK FAMILY (db=HMMPanther db_id=PTHR18964 from=69 to=298 evalue=3.2e-60)
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ACD62_139_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2667..2804)
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2667..2804 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50899.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD62_139_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2812..5865)
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serine/threonine protein kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=390 to=409)
PROTEIN_KINASE_ST (db=PatternScan db_id=PS00108 from=221 to=233 evalue=0.0 interpro_id=IPR008271 interpro_description=Serine/threonine-protein kinase, active site GO=Molecular Function: protein serine/threonine kinase activity (GO:0004674), Biological Process: protein amino acid phosphorylation (GO:0006468))
PROTEIN_KINASE_ATP (db=PatternScan db_id=PS00107 from=78 to=105 evalue=0.0 interpro_id=IPR017441 interpro_description=Protein kinase, ATP binding site GO=Molecular Function: protein kinase activity (GO:0004672), Molecular Function: ATP binding (GO:0005524), Biological Process: protein amino acid phosphorylation (GO:0006468))
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ACD62_139_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(5858..6466)
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ECF subfamily RNA polymerase sigma-24 subunit
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=21 to=199 evalue=1.6e-28 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=110 to=201 evalue=8.6e-14 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=6 to=93 evalue=5.3e-12 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
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ACD62_139_8
uncultured bacterium, Bacteria
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Not on your lists |
6579..7025
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6579..7025 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50902.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD62_139_9
uncultured bacterium, Bacteria
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Not on your lists |
7101..7262
|
hypothetical protein
50S ribosomal protein L5 {ECO:0000313|EMBL:EKD50903.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=5 Tax=Firmicutes RepID=N9WZC0_CLOIN
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ACD62_139_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(7280..7717)
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ACD62_139_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(7714..7956)
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coiled-coil (db=Coil db_id=coil from=15 to=36 evalue=NA)
seg (db=Seg db_id=seg from=29 to=46)
Uncharacterized protein {ECO:0000313|EMBL:EKD50905.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD62_139_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(7985..9391)
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glutamyl-tRNA synthetase
glutamyl-tRNA synthetase
Glutamyl-tRNA synthetase n=1 Tax=Geobacter sulfurreducens RepID=SYE_GEOSL (db=UNIREF evalue=5.0e-131 bit_score=471.0 identity=49.67 coverage=96.8017057569296)
seg (db=Seg db_id=seg from=165 to=174)
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