ggKbase home page

ACD62_144

Alias: ACD62_1220.16338.14

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_144_1

Not on your lists

284..1315
DNA (1032bp) protein (344aa)
Putative uncharacterized protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9CZV3_WOLRE (db=UNIREF evalue=7.0e-92 bit_score=340.0 identity=51.52 coverage=94.7674418604651)
glycoside hydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=36 to=42)
ACD62_144_2

Not on your lists

1453..3465
DNA (2013bp) protein (671aa)
tetanolysin O
seg (db=Seg db_id=seg from=560 to=571)
seg (db=Seg db_id=seg from=157 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD62_144_3

Not on your lists

comp(3476..5194)
DNA (1719bp) protein (573aa)
small GTP-binding protein
small GTP-binding protein
Small GTP-binding protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RDD0_AMMDK (db=UNIREF evalue=2.0e-170 bit_score=602.0 identity=53.31 coverage=97.3821989528796)
transmembrane_regions (db=TMHMM db_id=tmhmm from=386 to=408)
ACD62_144_4

Not on your lists

comp(5191..5427)
DNA (237bp) protein (79aa)
FeoA (db=HMMPfam db_id=PF04023 from=5 to=75 evalue=1.1e-12 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
no description (db=HMMSmart db_id=SM00899 from=4 to=76 evalue=5.6e-11 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
Uncharacterized protein {ECO:0000313|EMBL:EKD52248.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FeoA family protein
ACD62_144_5

Not on your lists

comp(5424..5810)
DNA (387bp) protein (129aa)
Mn-dependent transcriptional regulator
no description (db=HMMSmart db_id=SM00529 from=29 to=126 evalue=7.6e-28)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=6 to=78 evalue=4.3e-16 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
Fe_dep_repr_C (db=HMMPfam db_id=PF02742 from=69 to=125 evalue=1.4e-15 interpro_id=IPR001367 interpro_description=Iron dependent repressor GO=Molecular Function: transcription factor activity (GO:0003700), Molecular Function: iron ion binding (GO:0005506), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD62_144_6

Not on your lists

6115..8637
DNA (2523bp) protein (841aa)
hypothetical protein (db=KEGG evalue=1.0e-16 bit_score=92.4 identity=26.05 coverage=41.141498216409)
seg (db=Seg db_id=seg from=74 to=87)
seg (db=Seg db_id=seg from=687 to=694)
seg (db=Seg db_id=seg from=168 to=192)
ACD62_144_7

Not on your lists

comp(8648..9304)
DNA (657bp) protein (219aa)
FeS-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=116 to=138)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
ACD62_144_8

Not on your lists

9605..10768
DNA (1164bp) protein (388aa)
Cysteine proteinases (db=superfamily db_id=SSF54001 from=248 to=350 evalue=9.3e-06)
Transglut_core (db=HMMPfam db_id=PF01841 from=273 to=344 evalue=1.9e-05 interpro_id=IPR002931 interpro_description=Transglutaminase-like)
Uncharacterized protein {ECO:0000313|EMBL:EKD52252.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_144_9

Not on your lists

comp(10779..11675)
DNA (897bp) protein (299aa)
10779..11675 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD52253.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_144_10

Not on your lists

11920..12951
DNA (1032bp) protein (344aa)
Fic family protein
Fic family protein n=1 Tax=Methanobrevibacter ruminantium M1 RepID=D3DZB8_METRM (db=UNIREF evalue=3.0e-41 bit_score=172.0 identity=33.43 coverage=99.1279069767442)
coiled-coil (db=Coil db_id=coil from=75 to=96 evalue=NA)
Fic-like (db=superfamily db_id=SSF140931 from=77 to=273 evalue=1.8e-34)
ACD62_144_11

Not on your lists

comp(12963..13706)
DNA (744bp) protein (248aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5N1_9GAMM (db=UNIREF evalue=2.0e-09 bit_score=66.2 identity=29.94 coverage=65.3225806451613)
transmembrane_regions (db=TMHMM db_id=tmhmm from=224 to=246)
seg (db=Seg db_id=seg from=12 to=22)
ACD62_144_12

Not on your lists

comp(13715..14236)
DNA (522bp) protein (174aa)
flavin reductase
Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9I3_9CLOT (db=UNIREF evalue=1.0e-36 bit_score=155.0 identity=47.27 coverage=91.9540229885057)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=3 to=167 evalue=2.1e-19 interpro_id=IPR009002 interpro_description=FMN-binding split barrel, related)
no description (db=Gene3D db_id=G3DSA:2.30.110.10 from=18 to=155 evalue=1.2e-11 interpro_id=IPR012349 interpro_description=FMN-binding split barrel GO=Molecular Function: FMN binding (GO:0010181))
ACD62_144_13

Not on your lists

comp(14402..15691)
DNA (1290bp) protein (430aa)
hemL; glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
hemL; glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=GSA_THEYD (db=UNIREF evalue=2.0e-134 bit_score=482.0 identity=60.05 coverage=96.9767441860465)
seg (db=Seg db_id=seg from=270 to=280)
ACD62_144_14

Not on your lists

comp(15688..16374)
DNA (687bp) protein (229aa)
DNA recombination protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6BEX3_9RHOB (db=UNIREF evalue=1.0e-44 bit_score=182.0 identity=45.6 coverage=79.0393013100437)
rmuC; DNA recombination protein
RmuC (db=HMMPfam db_id=PF02646 from=1 to=185 evalue=5.8e-44 interpro_id=IPR003798 interpro_description=RmuC)
DNA recombination protein {ECO:0000313|EMBL:EKD52258.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 14 items

View Taxonomy