Alias: ACD62_7365.4059.17
name | lists | location/seqs | annotations | notes |
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ACD62_175_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..521)
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Ribonuclease HII n=3 Tax=Clostridium thermocellum RepID=RNH2_CLOTH (db=UNIREF evalue=6.0e-42 bit_score=172.0 identity=52.98 coverage=95.9537572254335)
ribonuclease HII (EC:3.1.26.4)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=9 to=173 evalue=4.9e-51 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=21 to=162 evalue=5.6e-40)
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ACD62_175_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(579..992)
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rplS; 50S ribosomal protein L19
RIBOSOMAL_L19 (db=PatternScan db_id=PS01015 from=86 to=101 evalue=0.0 interpro_id=IPR018257 interpro_description=Ribosomal protein L19, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L19 (db=HMMPfam db_id=PF01245 from=2 to=112 evalue=2.0e-45 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplS_bact: ribosomal protein L19 (db=HMMTigr db_id=TIGR01024 from=1 to=114 evalue=1.4e-44 interpro_id=IPR001857 interpro_description=Ribosomal protein L19 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_175_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(1011..1571)
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hypothetical protein
DUF2168 (db=HMMPfam db_id=PF09936 from=2 to=184 evalue=1.3e-73 interpro_id=IPR019230 interpro_description=Protein of unknown function DUF2168)
Uncharacterized protein {ECO:0000313|EMBL:EKD50282.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF2168 alias=ACD73_203732.8447.6G0005,ACD73_203732.8447.6_5,ACD73_C00097G00005 id=108784 tax=ACD73 species=unknown genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria organism_desc=Unknown
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ACD62_175_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1638..2330)
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tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JX95_DESAC (db=UNIREF evalue=1.0e-61 bit_score=239.0 identity=50.0 coverage=96.1038961038961)
trmD; transfer RNA (guanine-N(1)-)-methyltransferase(M1G-methyltransferase) (tRNA [GM37] methyltransferase) (EC:2.1.1.31)
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=230 evalue=1.1e-104 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=1 to=226 evalue=3.7e-95 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
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ACD62_175_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2402..2908)
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16S rRNA processing protein RimM (db=KEGG evalue=3.0e-09 bit_score=64.3 identity=24.56 coverage=95.2662721893491)
Ribosome maturation factor rimM n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=RIMM_SYNFM (db=UNIREF evalue=3.0e-09 bit_score=64.3 identity=24.56 coverage=95.2662721893491)
Translation proteins (db=superfamily db_id=SSF50447 from=5 to=93 evalue=1.3e-11 interpro_id=IPR009000 interpro_description=Translation elongation/initiation factor/Ribosomal, beta-barrel)
RimM (db=HMMPfam db_id=PF01782 from=9 to=90 evalue=7.5e-08 interpro_id=IPR002676 interpro_description=RimM protein GO=Biological Process: rRNA processing (GO:0006364))
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ACD62_175_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(2965..3195)
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hypothetical protein
Prokaryotic type KH domain (KH-domain type II) (db=superfamily db_id=SSF54814 from=2 to=61 evalue=3.4e-08 interpro_id=IPR009019 interpro_description=K Homology, prokaryotic type GO=Molecular Function: RNA binding (GO:0003723))
KH_1 (db=HMMPfam db_id=PF00013 from=32 to=66 evalue=0.00016 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=29 to=76 evalue=9.121 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723))
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ACD62_175_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(3336..3572)
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rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 n=1 Tax=Ruminococcus albus 8 RepID=D4UVQ2_RUMAL (db=UNIREF evalue=2.0e-17 bit_score=90.9 identity=55.56 coverage=97.4683544303797)
S16: ribosomal protein S16 (db=HMMTigr db_id=TIGR00002 from=3 to=78 evalue=1.2e-31 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S16 (db=HMMPanther db_id=PTHR12919 from=2 to=77 evalue=1.8e-29 interpro_id=IPR000307 interpro_description=Ribosomal protein S16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD62_175_8
uncultured bacterium, Bacteria
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Not on your lists |
3780..4064
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3780..4064 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD50287.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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