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ACD62_201

Alias: ACD62_21783.11907.16

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_201_1

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comp(3..1529)
DNA (1527bp) protein (509aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutaminyl-tRNA synthetase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X2M4_DESRD (db=UNIREF evalue=0.0 bit_score=716.0 identity=68.21 coverage=96.6601178781925)
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=40 to=51 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
ACD62_201_2

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1686..2723
DNA (1038bp) protein (346aa)
hypothetical protein (db=KEGG evalue=3.0e-09 bit_score=66.2 identity=20.3 coverage=93.3526011560694)
Q8F7D3_LEPIN_Q8F7D3; (db=BlastProDom db_id=PD133063 from=29 to=294 evalue=7.0e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKD51727.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD73_C00110G00003,ACD73_512973.2077.5G0003,ACD73_512973.2077.5_3 id=108871 tax=ACD73 species=Alcanivorax sp. DG881 genus=Alcanivorax taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_desc=Unknown
ACD62_201_3

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2788..4002
DNA (1215bp) protein (405aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=2 to=16)
Uncharacterized protein {ECO:0000313|EMBL:EKD51728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_201_4

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4066..4428
DNA (363bp) protein (121aa)
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=D4H8V3_DENA2 (db=UNIREF evalue=2.0e-43 bit_score=177.0 identity=74.11 coverage=91.7355371900827)
PII_GLNB_CTER (db=PatternScan db_id=PS00638 from=91 to=104 evalue=0.0 interpro_id=IPR017918 interpro_description=Nitrogen regulatory protein PII, conserved site GO=Biological Process: regulation of nitrogen utilization (GO:0006808), Molecular Function: enzyme regulator activity (GO:0030234))
PII_GLNB_UMP (db=PatternScan db_id=PS00496 from=54 to=59 evalue=0.0 interpro_id=IPR002332 interpro_description=Nitrogen regulatory protein P-II, urydylation site GO=Biological Process: regulation of nitrogen utilization (GO:0006808), Molecular Function: enzyme regulator activity (GO:0030234))
ACD62_201_5

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comp(4457..5503)
DNA (1047bp) protein (349aa)
zinc-binding alcohol dehydrogenase
zinc-binding alcohol dehydrogenase
L-erythro-3,5-diaminohexanoate dehydrogenase n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21RL4_RHOFD (db=UNIREF evalue=6.0e-101 bit_score=370.0 identity=57.02 coverage=97.134670487106)
seg (db=Seg db_id=seg from=164 to=177)
ACD62_201_6

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comp(5610..6863)
DNA (1254bp) protein (418aa)
U32 family peptidase
U32 family peptidase
Peptidase, U32 family n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVY2_DICNV (db=UNIREF evalue=9.0e-114 bit_score=414.0 identity=52.49 coverage=86.1244019138756)
PEPTIDASE_U32 (db=PatternScan db_id=PS01276 from=166 to=184 evalue=0.0 interpro_id=IPR001539 interpro_description=Peptidase U32 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
ACD62_201_7

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comp(6860..7546)
DNA (687bp) protein (229aa)
response regulator
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=177 to=204 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
CheY-like (db=superfamily db_id=SSF52172 from=11 to=147 evalue=4.7e-30 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=8 to=133 evalue=1.4e-27)
ACD62_201_8

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comp(7580..8989)
DNA (1410bp) protein (470aa)
putative signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=bacterium Ellin514 RepID=B9XQH3_9BACT (db=UNIREF evalue=3.0e-35 bit_score=153.0 identity=30.35 coverage=69.7872340425532)
seg (db=Seg db_id=seg from=119 to=131)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=336 to=468 evalue=1.0e-19 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
ACD62_201_9

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9100..9573
DNA (474bp) protein (158aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ78_SYNAS (db=UNIREF evalue=1.0e-22 bit_score=108.0 identity=36.67 coverage=83.5443037974684)
cytoplasmic protein
DUF1178 (db=HMMPfam db_id=PF06676 from=1 to=153 evalue=5.8e-35 interpro_id=IPR009562 interpro_description=Protein of unknown function DUF1178)
Uncharacterized protein {ECO:0000313|EMBL:EKD51734.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_201_10

Not on your lists

comp(9622..10350)
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=160 to=171)
seg (db=Seg db_id=seg from=30 to=53)
seg (db=Seg db_id=seg from=94 to=103)
ACD62_201_11

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10466..11944
DNA (1479bp) protein (493aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5CYN6_PELTS (db=UNIREF evalue=3.0e-148 bit_score=528.0 identity=52.18 coverage=96.9574036511156)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
Cofactor-independent phosphoglycerate mutase (db=HMMPIR db_id=PIRSF001492 from=1 to=493 evalue=9.1e-244 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
Displaying 11 items

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