ggKbase home page

ACD62_207

Alias: ACD62_88588.7158.11

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_207_1
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..288
DNA (288bp) protein (96aa)
1..288 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
ACD62_207_2

Not on your lists

311..1192
DNA (882bp) protein (294aa)
ribosomal RNA small subunit methyltransferase H
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=RSMH_CHLAD (db=UNIREF evalue=9.0e-51 bit_score=204.0 identity=40.74 coverage=97.6190476190476)
S-adenosyl-L-methionine dependent methyltransferase, MraW type (db=HMMPIR db_id=PIRSF004486 from=1 to=293 evalue=3.1e-93 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
TIGR00006: S-adenosyl-methyltransferase Mra (db=HMMTigr db_id=TIGR00006 from=1 to=292 evalue=9.1e-82 interpro_id=IPR002903 interpro_description=S-adenosyl-L-methionine-dependent methyltransferase, MraW GO=Molecular Function: methyltransferase activity (GO:0008168))
ACD62_207_3

Not on your lists

1194..1565
DNA (372bp) protein (124aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
FtsL (db=HMMPfam db_id=PF04999 from=29 to=112 evalue=4.0e-10 interpro_id=IPR007082 interpro_description=Cell division protein FtsL GO=Biological Process: cell cycle (GO:0007049), Cellular Component: integral to membrane (GO:0016021))
Uncharacterized protein {ECO:0000313|EMBL:EKD50074.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_207_4

Not on your lists

1566..3542
DNA (1977bp) protein (659aa)
penicillin-binding protein
penicillin-binding protein
Peptidoglycan glycosyltransferase n=1 Tax=Geobacter lovleyi SZ RepID=B3E3Y8_GEOLS (db=UNIREF evalue=4.0e-128 bit_score=462.0 identity=38.23 coverage=97.1168437025797)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD62_207_5

Not on your lists

3545..5098
DNA (1554bp) protein (518aa)
UDP-N-acetylmuramyl tripeptide synthetase
UDP-N-acetylmuramyl tripeptide synthetase
UDP-N-acetylmuramyl-tripeptide synthetase n=1 Tax=Geobacter sp. M18 RepID=C6MNI0_9DELT (db=UNIREF evalue=5.0e-98 bit_score=362.0 identity=45.03 coverage=91.8918918918919)
seg (db=Seg db_id=seg from=106 to=117)
ACD62_207_6

Not on your lists

5217..6596
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5BW22_NITHN (db=UNIREF evalue=8.0e-79 bit_score=298.0 identity=42.27 coverage=91.0869565217391)
murF: UDP-N-acetylmuramoyl-tripeptide--D-ala (db=HMMTigr db_id=TIGR01143 from=30 to=453 evalue=2.7e-135 interpro_id=IPR005863 interpro_description=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity (GO:0008766), Biological Process: peptidog
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE--D-ALANYL-D- ALANYL LIGASE (db=HMMPanther db_id=PTHR23135:SF3 from=106 to=459 evalue=3.1e-102 interpro_id=IPR005863 interpro_description=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase act
ACD62_207_7
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6601..7194
DNA (594bp) protein (198aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=74 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=97 to=114)
Displaying 7 items

View Taxonomy