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ACD62_234

Alias: ACD62_23549.12814.10

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_234_1

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3..992
DNA (990bp) protein (330aa)
Methyltransferase type 11 n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FTK8_SHESH (db=UNIREF evalue=1.0e-07 bit_score=60.8 identity=31.55 coverage=50.9090909090909)
methyltransferase type 11 (db=KEGG evalue=1.0e-07 bit_score=60.8 identity=31.55 coverage=50.9090909090909)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=84 to=322 evalue=3.7e-23)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=128 to=295 evalue=1.6e-14)
ACD62_234_2

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comp(1023..3485)
DNA (2463bp) protein (821aa)
DNA gyrase subunit alpha (EC:5.99.1.3)
DNA gyrase subunit alpha (EC:5.99.1.3)
DNA gyrase, A subunit n=3 Tax=Geobacter RepID=B5E7Q2_GEOBB (db=UNIREF evalue=0.0 bit_score=959.0 identity=59.43 coverage=98.0511571254568)
seg (db=Seg db_id=seg from=474 to=485)
ACD62_234_3

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3602..5677
DNA (2076bp) protein (692aa)
Primosomal protein N' n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRR8_DESOH (db=UNIREF evalue=1.0e-118 bit_score=431.0 identity=35.98 coverage=97.8323699421965)
primosomal protein N'
primosomal protein N'
seg (db=Seg db_id=seg from=667 to=677)
ACD62_234_4

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5826..6359
DNA (534bp) protein (178aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase (db=superfamily db_id=SSF56420 from=2 to=175 evalue=3.4e-53 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
Pep_deformylase (db=HMMPfam db_id=PF01327 from=5 to=160 evalue=9.6e-48 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
pept_deformyl: peptide deformylase (db=HMMTigr db_id=TIGR00079 from=3 to=169 evalue=1.9e-47 interpro_id=IPR000181 interpro_description=Formylmethionine deformylase GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: translation (GO:0006412), Molecular Function: peptide deformylase activity (GO:0042586))
ACD62_234_5

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comp(6339..7127)
DNA (789bp) protein (263aa)
yabD; putative deoxyribonuclease YabD
TATD_3 (db=PatternScan db_id=PS01091 from=192 to=208 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
TIGR00010: hydrolase, TatD family (db=HMMTigr db_id=TIGR00010 from=3 to=257 evalue=1.1e-102 interpro_id=IPR015991 interpro_description=Deoxyribonuclease, TatD Mg-dependent, prokaryote)
Mg-dependent DNase, TatD type (db=HMMPIR db_id=PIRSF005902 from=1 to=259 evalue=6.0e-97 interpro_id=IPR012278 interpro_description=Deoxyribonuclease, TatD Mg-dependent)
ACD62_234_6

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7346..7777
DNA (432bp) protein (144aa)
seg (db=Seg db_id=seg from=91 to=102)
Uncharacterized protein {ECO:0000313|EMBL:EKD51638.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_234_7

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8327..8635
DNA (309bp) protein (103aa)
seg (db=Seg db_id=seg from=13 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=65)
Uncharacterized protein {ECO:0000313|EMBL:EKD51639.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_234_8

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comp(8948..9589)
DNA (642bp) protein (214aa)
seg (db=Seg db_id=seg from=8 to=17)
TPR-like (db=superfamily db_id=SSF48452 from=25 to=205 evalue=6.3e-24)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=24 to=197 evalue=7.0e-19 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
TPR REPEAT CONTAINING PROTEIN (db=HMMPanther db_id=PTHR22904 from=32 to=129 evalue=2.0e-10)
ACD62_234_9

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9648..10670
DNA (1023bp) protein (341aa)
RNA methyltransferase
Uncharacterized RNA methyltransferase Bd3828 n=1 Tax=Bdellovibrio bacteriovorus RepID=Y3828_BDEBA (db=UNIREF evalue=8.0e-44 bit_score=181.0 identity=33.7 coverage=97.6539589442815)
TRMA_2 (db=PatternScan db_id=PS01231 from=322 to=332 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
TRMA_1 (db=PatternScan db_id=PS01230 from=271 to=301 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
ACD62_234_10

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10797..11585
DNA (789bp) protein (263aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methylococcus capsulatus RepID=Q60CN3_METCA (db=UNIREF evalue=1.0e-71 bit_score=273.0 identity=55.43 coverage=97.7186311787072)
seg (db=Seg db_id=seg from=141 to=153)
UNCHARACTERIZED DUF52 (db=HMMPanther db_id=PTHR11060 from=1 to=262 evalue=2.0e-50 interpro_id=IPR002737 interpro_description=UPF0103/Mediator of ErbB2-driven cell motility (Memo), related)
ACD62_234_11

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11807..12361
DNA (555bp) protein (185aa)
AMMECR1 domain-containing protein
AMMECR1-like (db=superfamily db_id=SSF143447 from=1 to=184 evalue=1.0e-55)
AMMECR1 (db=HMMPfam db_id=PF01871 from=11 to=183 evalue=1.8e-50 interpro_id=IPR002733 interpro_description=AMMECR1)
no description (db=Gene3D db_id=G3DSA:3.30.700.20 from=2 to=139 evalue=1.7e-30)
ACD62_234_12

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comp(12430..12852)
DNA (423bp) protein (141aa)
thiamine-phosphate pyrophosphorylase
TMP-TENI (db=HMMPfam db_id=PF02581 from=9 to=117 evalue=2.2e-26 interpro_id=IPR003733 interpro_description=Thiamine monophosphate synthase GO=Molecular Function: thiamin-phosphate diphosphorylase activity (GO:0004789), Biological Process: thiamin biosynthetic process (GO:0009228))
THIAMINE-PHOSPHATE PYROPHOSPHORYLASE (db=HMMPanther db_id=PTHR20857 from=9 to=112 evalue=2.5e-22)
THIAMINE-PHOSPHATE PYROPHOSPHORYLASE (db=HMMPanther db_id=PTHR20857:SF15 from=9 to=112 evalue=2.5e-22)
Displaying 12 items

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