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ACD62_249

Alias: ACD62_34646.11824.18

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_249_1

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592..1122
DNA (531bp) protein (177aa)
putative PaaX family transcriptional regulator
Putative transcriptional regulator, PaaX family n=1 Tax=Aminobacterium colombiense DSM 12261 RepID=D5EH18_AMICL (db=UNIREF evalue=2.0e-38 bit_score=161.0 identity=55.17 coverage=97.1751412429379)
seg (db=Seg db_id=seg from=115 to=130)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=3 to=74 evalue=4.0e-06)
ACD62_249_2

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1130..1606
DNA (477bp) protein (159aa)
NusG antitermination factor; K05785 transcriptional antiterminator RfaH (db=KEGG evalue=2.0e-17 bit_score=90.9 identity=31.9 coverage=95.5974842767296)
Transcription antitermination protein nusG n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I6V9_DESAP (db=UNIREF evalue=3.0e-17 bit_score=90.9 identity=31.9 coverage=95.5974842767296)
N-utilization substance G protein NusG, N-terminal domain (db=superfamily db_id=SSF82679 from=1 to=98 evalue=1.0e-17 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
NusG (db=HMMPfam db_id=PF02357 from=2 to=84 evalue=3.5e-12 interpro_id=IPR006645 interpro_description=Transcription antitermination protein, NusG, N-terminal GO=Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: positive regulation of RNA elongation from RNA polymerase II promoter (GO:0032968))
ACD62_249_3

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1829..2779
DNA (951bp) protein (317aa)
Oxidoreductase domain protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N0Q9_9BACT (db=UNIREF evalue=9.0e-124 bit_score=446.0 identity=62.66 coverage=99.3690851735016)
oxidoreductase domain-containing protein
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=3 to=194 evalue=3.7e-34)
OXIDOREDUCTASE (db=HMMPanther db_id=PTHR22604:SF14 from=51 to=281 evalue=2.0e-33)
ACD62_249_4

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2868..3953
DNA (1086bp) protein (362aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VRZ6_POLNA (db=UNIREF evalue=2.0e-113 bit_score=412.0 identity=54.17 coverage=98.6187845303867)
DegT/DnrJ/EryC1/StrS aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase
DegT_DnrJ_EryC1 (db=HMMPfam db_id=PF01041 from=14 to=357 evalue=1.5e-110 interpro_id=IPR000653 interpro_description=DegT/DnrJ/EryC1/StrS aminotransferase)
ACD62_249_5

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3991..4347
DNA (357bp) protein (119aa)
S23 ribosomal protein
S23 ribosomal protein n=1 Tax=Chlorobium limicola DSM 245 RepID=B3EF74_CHLL2 (db=UNIREF evalue=7.0e-20 bit_score=99.4 identity=42.34 coverage=92.436974789916)
Ribosomal_S23p (db=HMMPfam db_id=PF05635 from=3 to=111 evalue=1.0e-34 interpro_id=IPR008815 interpro_description=23S rRNA-associated protein)
S23 ribosomal protein {ECO:0000313|EMBL:EKD51206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_249_6

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4378..4875
DNA (498bp) protein (166aa)
hexapeptide transferase
Transferase hexapeptide repeat containing protein n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8DZD3_DICTD (db=UNIREF evalue=5.0e-64 bit_score=246.0 identity=75.78 coverage=96.3855421686747)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=3 to=155 evalue=1.3e-44 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
no description (db=Gene3D db_id=G3DSA:2.160.10.10 from=2 to=154 evalue=1.3e-37)
ACD62_249_7

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4883..6037
DNA (1155bp) protein (385aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Geobacter lovleyi SZ RepID=B3E8V3_GEOLS (db=UNIREF evalue=2.0e-126 bit_score=456.0 identity=60.73 coverage=96.8831168831169)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
Epimerase_2 (db=HMMPfam db_id=PF02350 from=23 to=378 evalue=4.0e-114 interpro_id=IPR003331 interpro_description=UDP-N-acetylglucosamine 2-epimerase GO=Biological Process: UDP-N-acetylglucosamine metabolic process (GO:0006047), Molecular Function: UDP-N-acetylglucosamine 2-epimerase activity (GO:0008761), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
ACD62_249_8

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6053..7120
DNA (1068bp) protein (356aa)
GDP-mannose 4,6-dehydratase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJ99_THEYD (db=UNIREF evalue=8.0e-147 bit_score=523.0 identity=66.76 coverage=96.9101123595506)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
gmd: GDP-mannose 4,6-dehydratase (db=HMMTigr db_id=TIGR01472 from=2 to=323 evalue=2.2e-204 interpro_id=IPR006368 interpro_description=GDP-mannose 4,6-dehydratase GO=Cellular Component: intracellular (GO:0005622), Molecular Function: GDP-mannose 4,6-dehydratase activity (GO:0008446), Biological Process: GDP-mannose metabolic process (GO:0019673))
ACD62_249_9

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7128..8090
DNA (963bp) protein (321aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZY81_DESOH (db=UNIREF evalue=3.0e-116 bit_score=421.0 identity=61.83 coverage=97.196261682243)
GDP-L-fucose synthetase (EC:1.1.1.271)
GDP-L-fucose synthetase (EC:1.1.1.271)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=9 to=318 evalue=1.1e-152)
ACD62_249_10

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8110..9948
DNA (1839bp) protein (613aa)
ABC transporter-like protein
ABC transporter-like protein
ABC transporter, multidrug efflux family n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S4Z0_SALRD (db=UNIREF evalue=1.0e-128 bit_score=464.0 identity=44.76 coverage=96.7373572593801)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD62_249_11

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9941..10936
DNA (996bp) protein (332aa)
Polysaccharide biosynthesis protein n=2 Tax=Clostridium butyricum RepID=B1QX85_CLOBU (db=UNIREF evalue=1.0e-128 bit_score=462.0 identity=68.28 coverage=98.1927710843374)
transmembrane anchored UDP-glucose 4-epimerase (EC:5.1.3.2)
transmembrane anchored UDP-glucose 4-epimerase (EC:5.1.3.2)
seg (db=Seg db_id=seg from=104 to=115)
ACD62_249_12

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10943..11863
DNA (921bp) protein (307aa)
Aldo/keto reductase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZCJ4_9BACT (db=UNIREF evalue=3.0e-59 bit_score=232.0 identity=40.28 coverage=91.5309446254072)
oxidoreductase, aryl-alcohol dehydrogenase like protein
NAD(P)-linked oxidoreductase (db=superfamily db_id=SSF51430 from=5 to=259 evalue=4.0e-41 interpro_id=IPR001395 interpro_description=Aldo/keto reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
no description (db=Gene3D db_id=G3DSA:3.20.20.100 from=5 to=259 evalue=5.1e-33 interpro_id=IPR001395 interpro_description=Aldo/keto reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
Displaying 12 items

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